RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 ASAH1Q13510 395 aa17.04■□□□□ 0.32
CLN6-205ENST00000564846 C2orf76Q3KRA6 126 aa17.04■□□□□ 0.32
CLN6-205ENST00000564846 CNEP1R1Q8N9A8 125 aa17.04■□□□□ 0.32
CLN6-205ENST00000564846 PP6455Q8WZ26 134 aa17.04■□□□□ 0.32
CLN6-205ENST00000564846 CEP295Q9C0D2 2601 aa17.04■□□□□ 0.32
CLN6-205ENST00000564846 URB1O60287 2271 aaKnown RBP17.03■□□□□ 0.32
CLN6-205ENST00000564846 hCG_2014768A0A024R1R8 64 aa17.03■□□□□ 0.32
CLN6-205ENST00000564846 MBD3L4A6NDZ8 208 aaPredicted RBP17.03■□□□□ 0.32
CLN6-205ENST00000564846 MBD3L3A6NE82 208 aaPredicted RBP17.03■□□□□ 0.32
CLN6-205ENST00000564846 MBD3L5A6NJ08 208 aaPredicted RBP17.03■□□□□ 0.32
CLN6-205ENST00000564846 TPPPO94811 219 aa17.03■□□□□ 0.32
CLN6-205ENST00000564846 ADRB1P08588 477 aa17.03■□□□□ 0.32
CLN6-205ENST00000564846 ARSBP15848 533 aa17.03■□□□□ 0.32
CLN6-205ENST00000564846 MMP15P51511 669 aa17.03■□□□□ 0.32
CLN6-205ENST00000564846 PLP2Q04941 152 aa17.03■□□□□ 0.32
CLN6-205ENST00000564846 Q6ZT83 130 aa17.03■□□□□ 0.32
CLN6-205ENST00000564846 OR52N4Q8NGI2 321 aa17.03■□□□□ 0.32
CLN6-205ENST00000564846 MBD3L2Q8NHZ7 208 aaPredicted RBP17.03■□□□□ 0.32
CLN6-205ENST00000564846 SNRNP27Q8WVK2 155 aaKnown RBP17.03■□□□□ 0.32
CLN6-205ENST00000564846 REEP6Q96HR9 211 aa17.03■□□□□ 0.32
CLN6-205ENST00000564846 C1QTNF5Q9BXJ0 243 aa17.03■□□□□ 0.32
CLN6-205ENST00000564846 FAIMQ9NVQ4 179 aa17.03■□□□□ 0.32
CLN6-205ENST00000564846 FREM1Q5H8C1 2179 aa17.03■□□□□ 0.32
CLN6-205ENST00000564846 ZNF503-AS2A6NEH8 195 aa17.02■□□□□ 0.32
CLN6-205ENST00000564846 CTDSPLO15194 276 aa17.02■□□□□ 0.32
CLN6-205ENST00000564846 ALDOBP05062 364 aa17.02■□□□□ 0.32
CLN6-205ENST00000564846 TAB1Q15750 504 aa17.02■□□□□ 0.32
CLN6-205ENST00000564846 ZNF324BQ6AW86 544 aaPredicted RBP17.02■□□□□ 0.32
CLN6-205ENST00000564846 C15orf40Q8WUR7 153 aa17.02■□□□□ 0.32
CLN6-205ENST00000564846 THAP7Q9BT49 309 aaPredicted RBP17.02■□□□□ 0.32
CLN6-205ENST00000564846 MRPS7Q9Y2R9 242 aaKnown RBP17.02■□□□□ 0.32
CLN6-205ENST00000564846 LAMA5O15230 3695 aa17.02■□□□□ 0.31
CLN6-205ENST00000564846 FIGNL2A6NMB9 653 aa17.02■□□□□ 0.31
CLN6-205ENST00000564846 MAGEB3O15480 346 aa17.02■□□□□ 0.31
CLN6-205ENST00000564846 ALX3O95076 343 aa17.02■□□□□ 0.31
CLN6-205ENST00000564846 STOMP27105 288 aa17.02■□□□□ 0.31
CLN6-205ENST00000564846 INPP1P49441 399 aa17.02■□□□□ 0.31
CLN6-205ENST00000564846 HIKESHIQ53FT3 197 aa17.02■□□□□ 0.31
CLN6-205ENST00000564846 HACD4Q5VWC8 232 aa17.02■□□□□ 0.31
CLN6-205ENST00000564846 COLCA1Q6ZS62 124 aa17.02■□□□□ 0.31
CLN6-205ENST00000564846 UTS2BQ765I0 119 aa17.02■□□□□ 0.31
CLN6-205ENST00000564846 GDPD3Q7L5L3 318 aa17.02■□□□□ 0.31
CLN6-205ENST00000564846 CCDC36Q8IYA8 594 aa17.02■□□□□ 0.31
CLN6-205ENST00000564846 OR5AS1Q8N127 324 aa17.02■□□□□ 0.31
CLN6-205ENST00000564846 SEMA6DQ8NFY4 1073 aa17.02■□□□□ 0.31
CLN6-205ENST00000564846 RFT1Q96AA3 541 aa17.02■□□□□ 0.31
CLN6-205ENST00000564846 ZFP3Q96NJ6 502 aa17.02■□□□□ 0.31
CLN6-205ENST00000564846 B3GNT2Q9NY97 397 aa17.02■□□□□ 0.31
CLN6-205ENST00000564846 PIGLQ9Y2B2 252 aa17.02■□□□□ 0.31
CLN6-205ENST00000564846 RHBDD3Q9Y3P4 386 aa17.02■□□□□ 0.31
CLN6-205ENST00000564846 LOC100509620A0A075B734 347 aa17.01■□□□□ 0.31
CLN6-205ENST00000564846 XRCC2O43543 280 aa17.01■□□□□ 0.31
CLN6-205ENST00000564846 CRHP06850 196 aa17.01■□□□□ 0.31
CLN6-205ENST00000564846 TPOP07202 933 aa17.01■□□□□ 0.31
CLN6-205ENST00000564846 IGHV1-2P23083 117 aa17.01■□□□□ 0.31
CLN6-205ENST00000564846 HOXD11P31277 338 aaPredicted RBP17.01■□□□□ 0.31
CLN6-205ENST00000564846 ZNF93P35789 620 aaPredicted RBP17.01■□□□□ 0.31
CLN6-205ENST00000564846 MNDAP41218 407 aa17.01■□□□□ 0.31
CLN6-205ENST00000564846 PER3P56645 1201 aa17.01■□□□□ 0.31
CLN6-205ENST00000564846 GSG1Q2KHT4 349 aa17.01■□□□□ 0.31
CLN6-205ENST00000564846 EIF2S3LQ2VIR3 472 aaKnown RBP17.01■□□□□ 0.31
CLN6-205ENST00000564846 TBRG1Q3YBR2 411 aa17.01■□□□□ 0.31
CLN6-205ENST00000564846 TMEM69Q5SWH9 247 aa17.01■□□□□ 0.31
CLN6-205ENST00000564846 OR4D6Q8NGJ1 314 aa17.01■□□□□ 0.31
CLN6-205ENST00000564846 AKAP1Q92667 903 aaKnown RBP eCLIP17.01■□□□□ 0.31
CLN6-205ENST00000564846 PTX4Q96A99 478 aa17.01■□□□□ 0.31
CLN6-205ENST00000564846 CHST5Q9GZS9 411 aa17.01■□□□□ 0.31
CLN6-205ENST00000564846 CNTD2Q9H8S5 307 aa17.01■□□□□ 0.31
CLN6-205ENST00000564846 NOX3Q9HBY0 568 aa17.01■□□□□ 0.31
CLN6-205ENST00000564846 ZNF71Q9NQZ8 489 aaPredicted RBP17.01■□□□□ 0.31
CLN6-205ENST00000564846 PLSCR4Q9NRQ2 329 aa17.01■□□□□ 0.31
CLN6-205ENST00000564846 TBCCD1Q9NVR7 557 aa17.01■□□□□ 0.31
CLN6-205ENST00000564846 ARHGAP21Q5T5U3 1957 aa17.01■□□□□ 0.31
CLN6-205ENST00000564846 MED12LQ86YW9 2145 aa17.01■□□□□ 0.31
CLN6-205ENST00000564846 GSTZ1O43708 216 aaPredicted RBP17■□□□□ 0.31
CLN6-205ENST00000564846 VWA1Q6PCB0 445 aa17■□□□□ 0.31
CLN6-205ENST00000564846 OR2AE1Q8NHA4 323 aa17■□□□□ 0.31
CLN6-205ENST00000564846 NKX3-1Q99801 234 aaPredicted RBP17■□□□□ 0.31
CLN6-205ENST00000564846 TMEM272A0A1B0GTI8 110 aa17■□□□□ 0.31
CLN6-205ENST00000564846 C5orf49A4QMS7 147 aa17■□□□□ 0.31
CLN6-205ENST00000564846 HCKP08631 526 aa17■□□□□ 0.31
CLN6-205ENST00000564846 HOXD4P09016 255 aaPredicted RBP17■□□□□ 0.31
CLN6-205ENST00000564846 FAHP16930 419 aa17■□□□□ 0.31
CLN6-205ENST00000564846 CDK2P24941 298 aa17■□□□□ 0.31
CLN6-205ENST00000564846 MAP2K3P46734 347 aa17■□□□□ 0.31
CLN6-205ENST00000564846 CXADRP78310 365 aa17■□□□□ 0.31
CLN6-205ENST00000564846 RIPPLY1Q0D2K3 151 aa17■□□□□ 0.31
CLN6-205ENST00000564846 FOXF2Q12947 444 aa17■□□□□ 0.31
CLN6-205ENST00000564846 C1orf185Q5T7R7 199 aa17■□□□□ 0.31
CLN6-205ENST00000564846 SEM1Q6ZVN7 128 aa17■□□□□ 0.31
CLN6-205ENST00000564846 Q8NA96 180 aa17■□□□□ 0.31
CLN6-205ENST00000564846 FAM57AQ8TBR7 257 aa17■□□□□ 0.31
CLN6-205ENST00000564846 TRIM63Q969Q1 353 aa17■□□□□ 0.31
CLN6-205ENST00000564846 SPSB4Q96A44 273 aa17■□□□□ 0.31
CLN6-205ENST00000564846 POM121L2Q96KW2 1035 aa17■□□□□ 0.31
CLN6-205ENST00000564846 ANKRD11Q6UB99 2663 aaPredicted RBP16.99■□□□□ 0.31
CLN6-205ENST00000564846 LINC00854A0A1B0GVQ3 168 aa16.99■□□□□ 0.31
CLN6-205ENST00000564846 LDLRAD4O15165 306 aa16.99■□□□□ 0.31
CLN6-205ENST00000564846 PLA2G10O15496 165 aa16.99■□□□□ 0.31
CLN6-205ENST00000564846 EEF1E1O43324 174 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms