RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	ZNF558	Q96NG5	402 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	NHS	Q6T4R5	1651 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	DAP3	P51398	398 aa	Known RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	FA2H	Q7L5A8	372 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	AMIGO3	Q86WK7	504 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	C9orf40	Q8IXQ3	194 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	KLHDC8A	Q8IYD2	350 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	ZPBP	Q9BS86	351 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	C18orf21	Q32NC0	220 aa	Predicted RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	APCDD1L	Q8NCL9	501 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	SLC35E1	Q96K37	410 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	CHODL	Q9H9P2	273 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	NAT8	Q9UHE5	227 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	ESPL1	Q14674	2120 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	EFS	O43281	561 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	DEDD	O75618	318 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	ZNF468	Q5VIY5	522 aa	Predicted RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	SBSN	Q6UWP8	590 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288		Q7L0L9	218 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	MRPL24	Q96A35	216 aa	Known RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	DDA1	Q9BW61	102 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	ENY2	Q9NPA8	101 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288		A0A087WUJ7	227 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288		M0QYG6	137 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	AGFG1	P52594	562 aa	Known RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	OR4B1	Q8NGF8	309 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	LHX4	Q969G2	390 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	OBP2A	Q9NY56	170 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288		A6NDN8	102 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	DLEU1	O43261	78 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	PRDX1	Q06830	199 aa	Known RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	HLA-DRB5	Q30154	266 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	STUM	Q69YW2	141 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	BCDIN3D	Q7Z5W3	292 aa	Known RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	OR11G2	Q8NGC1	345 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	PKIB	Q9C010	78 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288		B4E171	279 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	ITGB2	P05107	769 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	EFNB1	P98172	346 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	ARSJ	Q5FYB0	599 aa	Predicted RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	ZNF343	Q6P1L6	599 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	MKX	Q8IYA7	352 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	TIMM29	Q9BSF4	260 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	CEBPZOS	A8MTT3	80 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	LANCL1	O43813	399 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	HMGN2	P05204	90 aa	Known RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	EOGT	Q5NDL2	527 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	DMBX1	Q8NFW5	382 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	SH3RF2	Q8TEC5	729 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	SHROOM3	Q8TF72	1996 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	TRBV24-1	A0A075B6N3	115 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	SMIM10L2A	P0DMW4	78 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	SMIM10L2B	P0DMW5	78 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	PSMB10	P40306	273 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	PDZD11	Q5EBL8	140 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	HEPN1	Q6WQI6	88 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	TGIF2LY	Q8IUE0	185 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	ADAMTS17	Q8TE56	1095 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	SUSD6	Q92537	303 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	SLC25A44	Q96H78	314 aa	Predicted RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	TBX18	O95935	607 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	IL24	Q13007	206 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	HLA-B	Q31612	363 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	TAS1R1	Q7RTX1	841 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	CELF5	Q8N6W0	485 aa	Known RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	IKZF5	Q9H5V7	419 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	ZNF737	O75373	536 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	NKX2-1	P43699	371 aa	Predicted RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	TCTA	P57738	103 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	PFN3	P60673	137 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	RPL24	P83731	157 aa	Known RBP	3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	SLC25A35	Q3KQZ1	300 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	PAQR6	Q6TCH4	344 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	TP53INP2	Q8IXH6	220 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	NKX2-4	Q9H2Z4	354 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	CNIH4	Q9P003	139 aa		3.86	□□□□□ -1.79
MACF1-231	ENST00000564288	OR7A5	Q15622	319 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	GPR162	Q16538	588 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	MRGPRD	Q8TDS7	321 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	SHD	Q96IW2	340 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	ADGRG7	Q96K78	797 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	HSPB8	Q9UJY1	196 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	B3GALT1	Q9Y5Z6	326 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	TRHR	P34981	398 aa	Predicted RBP	3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	TRNP1	Q6NT89	227 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	CTU1	Q7Z7A3	348 aa	Known RBP	3.85	□□□□□ -1.79
MACF1-231	ENST00000564288		A0A0D9SEW6	157 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	USF1	P22415	310 aa	Predicted RBP	3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	ZNF93	P35789	620 aa	Predicted RBP	3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	C9orf135	Q5VTT2	229 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	TMEM231	Q9H6L2	316 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	CHST11	Q9NPF2	352 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	SRPK3	Q9UPE1	567 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	TMEM265	A0A087WTH1	108 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	TNFSF13	O75888	250 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	CSRP3	P50461	194 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	BPIFB3	P59826	476 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	KRTDAP	P60985	99 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	TIGIT	Q495A1	244 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	FBXW12	Q6X9E4	464 aa		3.85	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms