RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 EPHA2P29317 976 aa25.85■■□□□ 1.73
CMTM4-204ENST00000563952 MDH2P40926 338 aaKnown RBP25.85■■□□□ 1.73
CMTM4-204ENST00000563952 CD200P41217 278 aa25.85■■□□□ 1.73
CMTM4-204ENST00000563952 GFOD2Q3B7J2 385 aa25.85■■□□□ 1.73
CMTM4-204ENST00000563952 PRAMEF6Q5VXH4 476 aa25.85■■□□□ 1.73
CMTM4-204ENST00000563952 SPSB4Q96A44 273 aa25.85■■□□□ 1.73
CMTM4-204ENST00000563952 REEP6Q96HR9 211 aa25.85■■□□□ 1.73
CMTM4-204ENST00000563952 PGAM5Q96HS1 289 aa25.85■■□□□ 1.73
CMTM4-204ENST00000563952 G6PC2Q9NQR9 355 aa25.85■■□□□ 1.73
CMTM4-204ENST00000563952 MRPL15Q9P015 296 aaKnown RBP25.85■■□□□ 1.73
CMTM4-204ENST00000563952 LAMP5Q9UJQ1 280 aa25.85■■□□□ 1.73
CMTM4-204ENST00000563952 PHF1O43189 567 aaPredicted RBP25.84■■□□□ 1.73
CMTM4-204ENST00000563952 PMELP40967 661 aa25.84■■□□□ 1.73
CMTM4-204ENST00000563952 HCCSP53701 268 aa25.84■■□□□ 1.73
CMTM4-204ENST00000563952 LCN1P1Q5VSP4 162 aa25.84■■□□□ 1.73
CMTM4-204ENST00000563952 SLC16A9Q7RTY1 509 aa25.84■■□□□ 1.73
CMTM4-204ENST00000563952 PRSS45Q7RTY3 260 aa25.84■■□□□ 1.73
CMTM4-204ENST00000563952 CELF2-AS1Q8N7Q2 184 aa25.84■■□□□ 1.73
CMTM4-204ENST00000563952 PYDC1Q8WXC3 89 aa25.84■■□□□ 1.73
CMTM4-204ENST00000563952 SGK3Q96BR1 496 aa25.84■■□□□ 1.73
CMTM4-204ENST00000563952 CENPNQ96H22 339 aaPredicted RBP25.84■■□□□ 1.73
CMTM4-204ENST00000563952 TEAD3Q99594 435 aa25.84■■□□□ 1.73
CMTM4-204ENST00000563952 OR10A2Q9H208 303 aa25.84■■□□□ 1.73
CMTM4-204ENST00000563952 PATZ1Q9HBE1 687 aaKnown RBP25.84■■□□□ 1.73
CMTM4-204ENST00000563952 UFSP2Q9NUQ7 469 aa25.84■■□□□ 1.73
CMTM4-204ENST00000563952 SVEP1Q4LDE5 3571 aa25.84■■□□□ 1.73
CMTM4-204ENST00000563952 A0A0G2JMP0 313 aa25.83■■□□□ 1.73
CMTM4-204ENST00000563952 A0A0X1KG70 313 aa25.83■■□□□ 1.73
CMTM4-204ENST00000563952 CCDC182A6NF36 153 aa25.83■■□□□ 1.73
CMTM4-204ENST00000563952 GMDSO60547 372 aa25.83■■□□□ 1.73
CMTM4-204ENST00000563952 IRF2P14316 349 aa25.83■■□□□ 1.73
CMTM4-204ENST00000563952 GATA4P43694 442 aa25.83■■□□□ 1.73
CMTM4-204ENST00000563952 SLX4IPQ5VYV7 408 aa25.83■■□□□ 1.73
CMTM4-204ENST00000563952 LRRN1Q6UXK5 716 aa25.83■■□□□ 1.73
CMTM4-204ENST00000563952 BCDIN3DQ7Z5W3 292 aaKnown RBP25.83■■□□□ 1.73
CMTM4-204ENST00000563952 MUC20Q8N307 709 aaPredicted RBP25.83■■□□□ 1.73
CMTM4-204ENST00000563952 OR4M2Q8NGB6 313 aa25.83■■□□□ 1.73
CMTM4-204ENST00000563952 OR52H1Q8NGJ2 320 aa25.83■■□□□ 1.73
CMTM4-204ENST00000563952 OAZ3Q9UMX2 235 aa25.83■■□□□ 1.73
CMTM4-204ENST00000563952 SAC3D1A6NKF1 404 aa25.82■■□□□ 1.72
CMTM4-204ENST00000563952 ZAR1LA6NP61 321 aa25.82■■□□□ 1.72
CMTM4-204ENST00000563952 FAM3AP98173 230 aa25.82■■□□□ 1.72
CMTM4-204ENST00000563952 MPPED2Q15777 294 aa25.82■■□□□ 1.72
CMTM4-204ENST00000563952 ZNF181Q2M3W8 571 aa25.82■■□□□ 1.72
CMTM4-204ENST00000563952 FAM201AQ5SY85 155 aa25.82■■□□□ 1.72
CMTM4-204ENST00000563952 DCAF12L2Q5VW00 463 aa25.82■■□□□ 1.72
CMTM4-204ENST00000563952 KRT77Q7Z794 578 aa25.82■■□□□ 1.72
CMTM4-204ENST00000563952 C1orf87Q8N0U7 546 aa25.82■■□□□ 1.72
CMTM4-204ENST00000563952 TCEANCQ8N8B7 351 aa25.82■■□□□ 1.72
CMTM4-204ENST00000563952 OR11L1Q8NGX0 322 aa25.82■■□□□ 1.72
CMTM4-204ENST00000563952 CIB1Q99828 191 aa25.82■■□□□ 1.72
CMTM4-204ENST00000563952 YIPF3Q9GZM5 350 aa25.82■■□□□ 1.72
CMTM4-204ENST00000563952 ZNF319Q9P2F9 582 aa25.82■■□□□ 1.72
CMTM4-204ENST00000563952 ENOPH1Q9UHY7 261 aa25.82■■□□□ 1.72
CMTM4-204ENST00000563952 RNF212BA8MTL3 300 aa25.81■■□□□ 1.72
CMTM4-204ENST00000563952 FAM20BO75063 409 aa25.81■■□□□ 1.72
CMTM4-204ENST00000563952 FOXH1O75593 365 aa25.81■■□□□ 1.72
CMTM4-204ENST00000563952 ALOX5APP20292 161 aa25.81■■□□□ 1.72
CMTM4-204ENST00000563952 ZFP36P26651 326 aaKnown RBP25.81■■□□□ 1.72
CMTM4-204ENST00000563952 THBS2P35442 1172 aa25.81■■□□□ 1.72
CMTM4-204ENST00000563952 SEC61A1P61619 476 aaKnown RBP25.81■■□□□ 1.72
CMTM4-204ENST00000563952 KPNB1Q14974 876 aaKnown RBP25.81■■□□□ 1.72
CMTM4-204ENST00000563952 C12orf73Q69YU5 71 aa25.81■■□□□ 1.72
CMTM4-204ENST00000563952 ERGIC1Q969X5 290 aa25.81■■□□□ 1.72
CMTM4-204ENST00000563952 METTL17Q9H7H0 456 aaPredicted RBP25.81■■□□□ 1.72
CMTM4-204ENST00000563952 FBN1P35555 2871 aaKnown RBP25.81■■□□□ 1.72
CMTM4-204ENST00000563952 ATRQ13535 2644 aa25.81■■□□□ 1.72
CMTM4-204ENST00000563952 ANKRD30BLA7E2S9 258 aa25.8■■□□□ 1.72
CMTM4-204ENST00000563952 CEACAM18A8MTB9 384 aa25.8■■□□□ 1.72
CMTM4-204ENST00000563952 DDOSTP39656 456 aa25.8■■□□□ 1.72
CMTM4-204ENST00000563952 ACTR3P61158 418 aa25.8■■□□□ 1.72
CMTM4-204ENST00000563952 TMEM163Q8TC26 289 aa25.8■■□□□ 1.72
CMTM4-204ENST00000563952 IL4I1Q96RQ9 567 aa25.8■■□□□ 1.72
CMTM4-204ENST00000563952 FN3KRPQ9HA64 309 aa25.8■■□□□ 1.72
CMTM4-204ENST00000563952 TMEM165Q9HC07 324 aa25.8■■□□□ 1.72
CMTM4-204ENST00000563952 H2AFY2Q9P0M6 372 aaPredicted RBP25.8■■□□□ 1.72
CMTM4-204ENST00000563952 LRP12Q9Y561 859 aa25.8■■□□□ 1.72
CMTM4-204ENST00000563952 ARHGAP32A7KAX9 2087 aa25.79■■□□□ 1.72
CMTM4-204ENST00000563952 PPIAL4EA0A075B759 164 aa25.79■■□□□ 1.72
CMTM4-204ENST00000563952 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP25.79■■□□□ 1.72
CMTM4-204ENST00000563952 hCG_38984A0A1B0GV85 526 aa25.79■■□□□ 1.72
CMTM4-204ENST00000563952 PPIAL4DF5H284 164 aa25.79■■□□□ 1.72
CMTM4-204ENST00000563952 PPIAL4FP0DN26 164 aa25.79■■□□□ 1.72
CMTM4-204ENST00000563952 CFL1P23528 166 aaKnown RBP25.79■■□□□ 1.72
CMTM4-204ENST00000563952 Q8TCH9 128 aa25.79■■□□□ 1.72
CMTM4-204ENST00000563952 CNN2Q99439 309 aaKnown RBP25.79■■□□□ 1.72
CMTM4-204ENST00000563952 TMPRSS13Q9BYE2 586 aa25.79■■□□□ 1.72
CMTM4-204ENST00000563952 RIBC2Q9H4K1 309 aa25.79■■□□□ 1.72
CMTM4-204ENST00000563952 METRNQ9UJH8 293 aa25.79■■□□□ 1.72
CMTM4-204ENST00000563952 PPIAL4AQ9Y536 164 aa25.79■■□□□ 1.72
CMTM4-204ENST00000563952 LOC105371242A0A075B767 164 aa25.78■■□□□ 1.72
CMTM4-204ENST00000563952 F5H0A9 414 aaPredicted RBP25.78■■□□□ 1.72
CMTM4-204ENST00000563952 PSMD9O00233 223 aa25.78■■□□□ 1.72
CMTM4-204ENST00000563952 AVPP01185 164 aa25.78■■□□□ 1.72
CMTM4-204ENST00000563952 GRPP07492 148 aa25.78■■□□□ 1.72
CMTM4-204ENST00000563952 GSK3AP49840 483 aa25.78■■□□□ 1.72
CMTM4-204ENST00000563952 PSMA6P60900 246 aaKnown RBP25.78■■□□□ 1.72
CMTM4-204ENST00000563952 SRSF2Q01130 221 aaKnown RBP25.78■■□□□ 1.72
CMTM4-204ENST00000563952 MEPCEQ7L2J0 689 aaKnown RBP25.78■■□□□ 1.72
CMTM4-204ENST00000563952 KLBQ86Z14 1044 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms