RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 EGLN1Q9GZT9 426 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 FN3KQ9H479 309 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 TOR3AQ9H497 397 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 CDH20Q9HBT6 801 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 POLE4Q9NR33 117 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 DCAF16Q9NXF7 216 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 RRP15Q9Y3B9 282 aaKnown RBP13.3□□□□□ -0.28
RNF40-205ENST00000563909 PLXNB1O43157 2135 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 A8MXK9 166 aa13.29□□□□□ -0.28
RNF40-205ENST00000563909 DCTN6O00399 190 aa13.29□□□□□ -0.28
RNF40-205ENST00000563909 MELTFP08582 738 aa13.29□□□□□ -0.28
RNF40-205ENST00000563909 SLC36A2Q495M3 483 aa13.29□□□□□ -0.28
RNF40-205ENST00000563909 ESCO2Q56NI9 601 aa13.29□□□□□ -0.28
RNF40-205ENST00000563909 TMEM53Q6P2H8 277 aa13.29□□□□□ -0.28
RNF40-205ENST00000563909 BTNL3Q6UXE8 466 aa13.29□□□□□ -0.28
RNF40-205ENST00000563909 LRRN1Q6UXK5 716 aa13.29□□□□□ -0.28
RNF40-205ENST00000563909 LRRC18Q8N456 261 aa13.29□□□□□ -0.28
RNF40-205ENST00000563909 PROKR2Q8NFJ6 384 aa13.29□□□□□ -0.28
RNF40-205ENST00000563909 DYRK2Q92630 601 aa13.29□□□□□ -0.28
RNF40-205ENST00000563909 OTULINQ96BN8 352 aa13.29□□□□□ -0.28
RNF40-205ENST00000563909 SH3GL3Q99963 347 aa13.29□□□□□ -0.28
RNF40-205ENST00000563909 KRTAP17-1Q9BYP8 105 aa13.29□□□□□ -0.28
RNF40-205ENST00000563909 NMNAT2Q9BZQ4 307 aa13.29□□□□□ -0.28
RNF40-205ENST00000563909 VCXQ9H320 206 aa13.29□□□□□ -0.28
RNF40-205ENST00000563909 SMPD3Q9NY59 655 aaPredicted RBP13.29□□□□□ -0.28
RNF40-205ENST00000563909 POMT1Q9Y6A1 747 aa13.29□□□□□ -0.28
RNF40-205ENST00000563909 H0YL77 283 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 GPR137BO60478 399 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 SNAP29O95721 258 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 IGHV3-13P01766 116 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 HLA-DQA2P01906 255 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 CST2P09228 141 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 SPI1P17947 270 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 BLVRAP53004 296 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 UCP2P55851 309 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 CDC42P60953 191 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 PCBD1P61457 104 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 LSM6P62312 80 aaKnown RBP13.28□□□□□ -0.28
RNF40-205ENST00000563909 HSF2Q03933 536 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 KCNMB1Q16558 191 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 OXLD1Q5BKU9 147 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 CPOQ8IVL8 374 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 OR9Q1Q8NGQ5 310 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 PTP4A1Q93096 173 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 FAM71F1Q96KD3 344 aaPredicted RBP13.28□□□□□ -0.28
RNF40-205ENST00000563909 HRASLS5Q96KN8 279 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 WWC2-AS2Q96NR7 200 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 BCL2L14Q9BZR8 327 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 C1orf198Q9H425 327 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 RNF121Q9H920 327 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 CCNB1IP1Q9NPC3 277 aa13.28□□□□□ -0.28
RNF40-205ENST00000563909 NOTCH3Q9UM47 2321 aa13.27□□□□□ -0.28
RNF40-205ENST00000563909 RYR2Q92736 4967 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 PLSCR5A0PG75 271 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 FAM183AA6NL82 134 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 C12orf71A8MTZ7 269 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 ATP6V1G2O95670 118 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 PTHP01270 115 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 FMO3P31513 532 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 PYCR1P32322 319 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 EFNB1P98172 346 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 PAX2Q02962 417 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 TBC1D28Q2M2D7 210 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 TMEM155Q4W5P6 130 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 SPRNQ5BIV9 151 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 SLC35D3Q5M8T2 416 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 PLBD1Q6P4A8 553 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 SYT9Q86SS6 491 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 LRRC28Q86X40 367 aaPredicted RBP13.27□□□□□ -0.29
RNF40-205ENST00000563909 C1orf174Q8IYL3 243 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 TCEANCQ8N8B7 351 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 ZNF555Q8NEP9 628 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 OR1J2Q8NGS2 313 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 TMEM163Q8TC26 289 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 SSMEM1Q8WWF3 244 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 TRUB1Q8WWH5 349 aaKnown RBP13.27□□□□□ -0.29
RNF40-205ENST00000563909 MBOAT4Q96T53 435 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 VCX3BQ9H321 246 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 GMPPBQ9Y5P6 360 aa13.27□□□□□ -0.29
RNF40-205ENST00000563909 LOC100130705A0A1B0GUX0 176 aa13.26□□□□□ -0.29
RNF40-205ENST00000563909 E9PQ18 207 aa13.26□□□□□ -0.29
RNF40-205ENST00000563909 F5H0A9 414 aaPredicted RBP13.26□□□□□ -0.29
RNF40-205ENST00000563909 SLC16A6O15403 523 aa13.26□□□□□ -0.29
RNF40-205ENST00000563909 PRODHO43272 600 aa13.26□□□□□ -0.29
RNF40-205ENST00000563909 PRKYO43930 277 aa13.26□□□□□ -0.29
RNF40-205ENST00000563909 GLCEO94923 617 aa13.26□□□□□ -0.29
RNF40-205ENST00000563909 SCG5P05408 212 aa13.26□□□□□ -0.29
RNF40-205ENST00000563909 GYPBP06028 91 aa13.26□□□□□ -0.29
RNF40-205ENST00000563909 CLUP10909 449 aa13.26□□□□□ -0.29
RNF40-205ENST00000563909 ZNF823P16415 610 aa13.26□□□□□ -0.29
RNF40-205ENST00000563909 GGT2P36268 569 aa13.26□□□□□ -0.29
RNF40-205ENST00000563909 ENDOGQ14249 297 aaKnown RBP13.26□□□□□ -0.29
RNF40-205ENST00000563909 SLC26A10Q8NG04 563 aa13.26□□□□□ -0.29
RNF40-205ENST00000563909 OR51L1Q8NGJ5 315 aa13.26□□□□□ -0.29
RNF40-205ENST00000563909 OR8J1Q8NGP2 316 aa13.26□□□□□ -0.29
RNF40-205ENST00000563909 OR1J1Q8NGS3 322 aa13.26□□□□□ -0.29
RNF40-205ENST00000563909 FAM81AQ8TBF8 368 aa13.26□□□□□ -0.29
RNF40-205ENST00000563909 TBC1D15Q8TC07 691 aa13.26□□□□□ -0.29
RNF40-205ENST00000563909 CDADC1Q9BWV3 514 aa13.26□□□□□ -0.29
RNF40-205ENST00000563909 HCAR1Q9BXC0 346 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms