RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 STARD10Q9Y365 291 aa8.79□□□□□ -1
SMG1-208ENST00000563448 V9GYS6 101 aa8.79□□□□□ -1
SMG1-208ENST00000563448 TRAV8-7A0A075B6U6 113 aa8.78□□□□□ -1
SMG1-208ENST00000563448 A6NIN4 97 aa8.78□□□□□ -1
SMG1-208ENST00000563448 CASKO14936 926 aa8.78□□□□□ -1
SMG1-208ENST00000563448 XRCC2O43543 280 aa8.78□□□□□ -1
SMG1-208ENST00000563448 NCR1O76036 304 aa8.78□□□□□ -1
SMG1-208ENST00000563448 EPXP11678 715 aa8.78□□□□□ -1
SMG1-208ENST00000563448 ZNF35P13682 527 aa8.78□□□□□ -1
SMG1-208ENST00000563448 IGFBP3P17936 291 aaPredicted RBP8.78□□□□□ -1
SMG1-208ENST00000563448 MYL9P24844 172 aa8.78□□□□□ -1
SMG1-208ENST00000563448 ZNF92Q03936 586 aa8.78□□□□□ -1
SMG1-208ENST00000563448 TNK1Q13470 666 aa8.78□□□□□ -1
SMG1-208ENST00000563448 FBXL19-AS1Q494R0 122 aa8.78□□□□□ -1
SMG1-208ENST00000563448 CEP78Q5JTW2 689 aa8.78□□□□□ -1
SMG1-208ENST00000563448 SEZ6L2Q6UXD5 910 aa8.78□□□□□ -1
SMG1-208ENST00000563448 LRRTM1Q86UE6 522 aa8.78□□□□□ -1
SMG1-208ENST00000563448 THRSPQ92748 146 aa8.78□□□□□ -1
SMG1-208ENST00000563448 SLC25A46Q96AG3 418 aa8.78□□□□□ -1
SMG1-208ENST00000563448 FGGYQ96C11 551 aa8.78□□□□□ -1
SMG1-208ENST00000563448 MUCL1Q96DR8 90 aa8.78□□□□□ -1
SMG1-208ENST00000563448 ADAT3Q96EY9 351 aaPredicted RBP8.78□□□□□ -1
SMG1-208ENST00000563448 GFI1Q99684 422 aa8.78□□□□□ -1
SMG1-208ENST00000563448 SLIRPQ9GZT3 109 aaKnown RBP8.78□□□□□ -1
SMG1-208ENST00000563448 OR10A4Q9H209 315 aa8.78□□□□□ -1
SMG1-208ENST00000563448 CDH20Q9HBT6 801 aa8.78□□□□□ -1
SMG1-208ENST00000563448 A0A0G2JK05 382 aa8.78□□□□□ -1
SMG1-208ENST00000563448 hCG_38984A0A1B0GV85 526 aa8.78□□□□□ -1
SMG1-208ENST00000563448 ICMTO60725 284 aa8.78□□□□□ -1
SMG1-208ENST00000563448 DHRS3O75911 302 aa8.78□□□□□ -1
SMG1-208ENST00000563448 CD2P06729 351 aa8.78□□□□□ -1
SMG1-208ENST00000563448 ZNF12P17014 697 aa8.78□□□□□ -1
SMG1-208ENST00000563448 ZNF83P51522 516 aa8.78□□□□□ -1
SMG1-208ENST00000563448 PRSS12P56730 875 aa8.78□□□□□ -1
SMG1-208ENST00000563448 OR10A3P58181 314 aa8.78□□□□□ -1
SMG1-208ENST00000563448 DGUOKQ16854 277 aa8.78□□□□□ -1
SMG1-208ENST00000563448 C1QTNF12Q5T7M4 302 aa8.78□□□□□ -1
SMG1-208ENST00000563448 ALKBH2Q6NS38 261 aa8.78□□□□□ -1
SMG1-208ENST00000563448 RFPL4BQ6ZWI9 263 aa8.78□□□□□ -1
SMG1-208ENST00000563448 TPRA1Q86W33 373 aa8.78□□□□□ -1
SMG1-208ENST00000563448 PARP16Q8N5Y8 322 aa8.78□□□□□ -1
SMG1-208ENST00000563448 SPSB4Q96A44 273 aa8.78□□□□□ -1
SMG1-208ENST00000563448 DACH2Q96NX9 599 aa8.78□□□□□ -1
SMG1-208ENST00000563448 USB1Q9BQ65 265 aaKnown RBP8.78□□□□□ -1
SMG1-208ENST00000563448 SLC30A2Q9BRI3 323 aa8.78□□□□□ -1
SMG1-208ENST00000563448 OR51B6Q9H340 312 aa8.78□□□□□ -1
SMG1-208ENST00000563448 RGCCQ9H4X1 137 aa8.78□□□□□ -1
SMG1-208ENST00000563448 TBCCD1Q9NVR7 557 aa8.78□□□□□ -1
SMG1-208ENST00000563448 TAS2R4Q9NYW5 299 aa8.78□□□□□ -1
SMG1-208ENST00000563448 PTTG3PQ9NZH4 202 aa8.78□□□□□ -1
SMG1-208ENST00000563448 CCDC59Q9P031 241 aaKnown RBP8.78□□□□□ -1
SMG1-208ENST00000563448 AK6Q9Y3D8 172 aaKnown RBP8.78□□□□□ -1
SMG1-208ENST00000563448 LOC390937A0A1W2PQ73 354 aa8.77□□□□□ -1.01
SMG1-208ENST00000563448 M0R1B8 84 aa8.77□□□□□ -1.01
SMG1-208ENST00000563448 SMPD2O60906 423 aa8.77□□□□□ -1.01
SMG1-208ENST00000563448 MTRF1O75570 445 aaKnown RBP8.77□□□□□ -1.01
SMG1-208ENST00000563448 THBDP07204 575 aa8.77□□□□□ -1.01
SMG1-208ENST00000563448 ADRA2CP18825 462 aa8.77□□□□□ -1.01
SMG1-208ENST00000563448 FSTP19883 344 aa8.77□□□□□ -1.01
SMG1-208ENST00000563448 RAB3BP20337 219 aa8.77□□□□□ -1.01
SMG1-208ENST00000563448 CALCRP30988 508 aa8.77□□□□□ -1.01
SMG1-208ENST00000563448 PEX19P40855 299 aa8.77□□□□□ -1.01
SMG1-208ENST00000563448 RORCP51449 518 aa8.77□□□□□ -1.01
SMG1-208ENST00000563448 FAM3AP98173 230 aa8.77□□□□□ -1.01
SMG1-208ENST00000563448 HNRNPA0Q13151 305 aaKnown RBP8.77□□□□□ -1.01
SMG1-208ENST00000563448 GK2Q14410 553 aaPredicted RBP8.77□□□□□ -1.01
SMG1-208ENST00000563448 C3orf36Q3SXR2 165 aa8.77□□□□□ -1.01
SMG1-208ENST00000563448 MTFR2Q6P444 385 aa8.77□□□□□ -1.01
SMG1-208ENST00000563448 CCDC54Q8NEL0 328 aa8.77□□□□□ -1.01
SMG1-208ENST00000563448 AKAP1Q92667 903 aaKnown RBP eCLIP8.77□□□□□ -1.01
SMG1-208ENST00000563448 MOV10Q9HCE1 1003 aaKnown RBP8.77□□□□□ -1.01
SMG1-208ENST00000563448 TCF7L1Q9HCS4 588 aa8.77□□□□□ -1.01
SMG1-208ENST00000563448 PLEKHB1Q9UF11 243 aaPredicted RBP8.77□□□□□ -1.01
SMG1-208ENST00000563448 ZNF391Q9UJN7 358 aa8.77□□□□□ -1.01
SMG1-208ENST00000563448 FOXJ3Q9UPW0 622 aa8.77□□□□□ -1.01
SMG1-208ENST00000563448 IGHV2OR16-5A0A0B4J2B6 119 aa8.76□□□□□ -1.01
SMG1-208ENST00000563448 MAS1P04201 325 aa8.76□□□□□ -1.01
SMG1-208ENST00000563448 FAM157BP0CG42 384 aa8.76□□□□□ -1.01
SMG1-208ENST00000563448 ACKR3P25106 362 aa8.76□□□□□ -1.01
SMG1-208ENST00000563448 DDOSTP39656 456 aa8.76□□□□□ -1.01
SMG1-208ENST00000563448 NAAAQ02083 359 aa8.76□□□□□ -1.01
SMG1-208ENST00000563448 HLXQ14774 488 aaPredicted RBP8.76□□□□□ -1.01
SMG1-208ENST00000563448 SERPINA12Q8IW75 414 aa8.76□□□□□ -1.01
SMG1-208ENST00000563448 CA5BP1Q8WTZ4 195 aa8.76□□□□□ -1.01
SMG1-208ENST00000563448 RNASE6Q93091 150 aaKnown RBP8.76□□□□□ -1.01
SMG1-208ENST00000563448 ZC3HAV1LQ96H79 300 aaKnown RBP8.76□□□□□ -1.01
SMG1-208ENST00000563448 WFIKKN1Q96NZ8 548 aa8.76□□□□□ -1.01
SMG1-208ENST00000563448 REPIN1Q9BWE0 567 aaKnown RBP8.76□□□□□ -1.01
SMG1-208ENST00000563448 NXF2Q9GZY0 626 aaKnown RBP8.76□□□□□ -1.01
SMG1-208ENST00000563448 ZCCHC4Q9H5U6 513 aa8.76□□□□□ -1.01
SMG1-208ENST00000563448 EIF3KQ9UBQ5 218 aaKnown RBP8.76□□□□□ -1.01
SMG1-208ENST00000563448 PIGLQ9Y2B2 252 aa8.76□□□□□ -1.01
SMG1-208ENST00000563448 CADP27708 2225 aa8.76□□□□□ -1.01
SMG1-208ENST00000563448 KMT2BQ9UMN6 2715 aaPredicted RBP8.76□□□□□ -1.01
SMG1-208ENST00000563448 J3QW42 95 aa8.76□□□□□ -1.01
SMG1-208ENST00000563448 PDCD5O14737 125 aa8.76□□□□□ -1.01
SMG1-208ENST00000563448 FAHP16930 419 aa8.76□□□□□ -1.01
SMG1-208ENST00000563448 ZNF20P17024 532 aa8.76□□□□□ -1.01
SMG1-208ENST00000563448 GRNP28799 593 aaKnown RBP8.76□□□□□ -1.01
SMG1-208ENST00000563448 SOX6P35712 828 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms