RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 MYRFQ9Y2G1 1151 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 R4GMQ9 66 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 ACANP16112 2415 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 TMEM269A0A1B0GVZ9 245 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 CD300LBA8K4G0 201 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 NDUFS8O00217 210 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 PSMD9O00233 223 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 MLNRO43193 412 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 TIMM8AO60220 97 aaPredicted RBP11.4□□□□□ -0.58
CDH1-204ENST00000562118 FADS2O95864 444 aaKnown RBP11.4□□□□□ -0.58
CDH1-204ENST00000562118 HPXP02790 462 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 MT-ND5P03915 603 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 CCL1P22362 96 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 DDOSTP39656 456 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 MAGEB1P43366 347 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 HSPA13P48723 471 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 KLHL22Q53GT1 634 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 C6orf52Q5T4I8 152 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 LIPNQ5VXI9 398 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 PLEKHG7Q6ZR37 379 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 FAM57BQ71RH2 274 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 THAP5Q7Z6K1 395 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.4□□□□□ -0.58
CDH1-204ENST00000562118 SYS1Q8N2H4 156 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 ZNF525Q8N782 197 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 CELF2-AS1Q8N7Q2 184 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 OR10H4Q8NGA5 316 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 OR52I1Q8NGK6 324 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 RPS4Y2Q8TD47 263 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 RORBQ92753 470 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 REEP6Q96HR9 211 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 VRK1Q99986 396 aaPredicted RBP11.4□□□□□ -0.58
CDH1-204ENST00000562118 TPK1Q9H3S4 243 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 ERVK13-1Q9NX77 482 aa11.4□□□□□ -0.58
CDH1-204ENST00000562118 CNOT2Q9NZN8 540 aaKnown RBP11.4□□□□□ -0.58
CDH1-204ENST00000562118 PLSCR5A0PG75 271 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 MAGEB4O15481 346 aaPredicted RBP11.39□□□□□ -0.59
CDH1-204ENST00000562118 LY6HO94772 140 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 TTRP02766 147 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 KRT8P05787 483 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 ANXA2P07355 339 aaKnown RBP11.39□□□□□ -0.59
CDH1-204ENST00000562118 ERCC1P07992 297 aaPredicted RBP11.39□□□□□ -0.59
CDH1-204ENST00000562118 LIMS3P0CW19 117 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 LIMS4P0CW20 117 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 ATP6V1B1P15313 513 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 ACKR3P25106 362 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 DCKP27707 260 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 VHLP40337 213 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 CRYBB2P43320 205 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 GATA4P43694 442 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 ACTA2P62736 377 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 ACTG2P63267 376 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 CLEC12BQ2HXU8 276 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 IZUMO2Q6UXV1 221 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 MRPL21Q7Z2W9 205 aaKnown RBP11.39□□□□□ -0.59
CDH1-204ENST00000562118 CATSPERDQ86XM0 798 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 KLBQ86Z14 1044 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 ELMOD2Q8IZ81 293 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 ZNF485Q8NCK3 441 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 OR13G1Q8NGZ3 307 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 COX4I2Q96KJ9 171 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 SIGLEC11Q96RL6 698 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 TBX5Q99593 518 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 TTTY10Q9BZA0 68 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 PBOV1Q9GZY1 135 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 SLC22A4Q9H015 551 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 MSL2Q9HCI7 577 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 AMBNQ9NP70 447 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 IL19Q9UHD0 177 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 PSORS1C1Q9UIG5 152 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 ITGB1BP2Q9UKP3 347 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 DIMT1Q9UNQ2 313 aaKnown RBP11.39□□□□□ -0.59
CDH1-204ENST00000562118 SNX5Q9Y5X3 404 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 MED13LQ71F56 2210 aa11.39□□□□□ -0.59
CDH1-204ENST00000562118 ABCA2Q9BZC7 2435 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 IGHV4-30-2A0A087WSY4 118 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 A0A1B0GTI1 187 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 IRGMA1A4Y4 181 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 DHRS7CA6NNS2 312 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 SSX4O60224 188 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 DAOP14920 347 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 ACHEP22303 614 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 CD200P41217 278 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 GSK3AP49840 483 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 CCR9P51686 369 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 SPRNQ5BIV9 151 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 ZBTB37Q5TC79 503 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 RNLSQ5VYX0 342 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 PRSS35Q8N3Z0 413 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 OR56B2PQ8NGI1 322 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 HAVCR2Q8TDQ0 301 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 UBASH3BQ8TF42 649 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 RDH5Q92781 318 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 GGHQ92820 318 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 YIPF5Q969M3 257 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 PELI1Q96FA3 418 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 PGAM5Q96HS1 289 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 Q96MF0 132 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 MYCBPQ99417 103 aaPredicted RBP11.38□□□□□ -0.59
CDH1-204ENST00000562118 RHNO1Q9BSD3 238 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms