RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 PM20D2Q8IYS1 436 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 CA13Q8N1Q1 262 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 BPIFB2Q8N4F0 458 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 LSMEM1Q8N8F7 131 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 PLPP5Q8NEB5 264 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 OR2T33Q8NG76 320 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 GPR32P1Q8NGA4 272 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 OR52L1Q8NGH7 329 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 OR6T1Q8NGN1 323 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 OR9A2Q8NGT5 310 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 OR9A4Q8NGU2 314 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 OR14L1PQ8NHC6 308 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 VANGL1Q8TAA9 524 aaPredicted RBP2.74□□□□□ -1.97
SPG11-225ENST00000561391 CNIH3Q8TBE1 160 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 SLC7A13Q8TCU3 470 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 HAVCR2Q8TDQ0 301 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 GPR151Q8TDV0 419 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 DNAJA4Q8WW22 397 aaPredicted RBP2.74□□□□□ -1.97
SPG11-225ENST00000561391 AP3S1Q92572 193 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 GGHQ92820 318 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 TSLPQ969D9 159 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 UCN3Q969E3 161 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 STARD4Q96DR4 205 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 ZHX1-C8orf76Q96EF9 292 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 FAHD2AQ96GK7 314 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 C16orf58Q96GQ5 468 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 SLC41A3Q96GZ6 507 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 TMEM68Q96MH6 324 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 CMTM3Q96MX0 182 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 DGAT2Q96PD7 388 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 OR1F2PQ96R84 312 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 IL4I1Q96RQ9 567 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 SDF2Q99470 211 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 MGLLQ99685 303 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 MCHR1Q99705 422 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 NIPSNAP1Q9BPW8 284 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 SLC25A33Q9BSK2 321 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 LMF2Q9BU23 707 aaKnown RBP2.74□□□□□ -1.97
SPG11-225ENST00000561391 SLC19A3Q9BZV2 496 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 SLC38A1Q9H2H9 487 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 FN3KQ9H479 309 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 ACKR4Q9NPB9 350 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 PRTFDC1Q9NRG1 225 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 MAN2C1Q9NTJ4 1040 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 PAK1IP1Q9NWT1 392 aaPredicted RBP2.74□□□□□ -1.97
SPG11-225ENST00000561391 RPS6KB2Q9UBS0 482 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 SSR3Q9UNL2 185 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 DIMT1Q9UNQ2 313 aaKnown RBP2.74□□□□□ -1.97
SPG11-225ENST00000561391 ZNF443Q9Y2A4 671 aaPredicted RBP2.74□□□□□ -1.97
SPG11-225ENST00000561391 SLC35A3Q9Y2D2 325 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 GSTK1Q9Y2Q3 226 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 YARS2Q9Y2Z4 477 aaKnown RBP2.74□□□□□ -1.97
SPG11-225ENST00000561391 EXOSC1Q9Y3B2 195 aaKnown RBP2.74□□□□□ -1.97
SPG11-225ENST00000561391 MED31Q9Y3C7 131 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 ADAM18Q9Y3Q7 739 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 UGT2A1Q9Y4X1 527 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 PEX16Q9Y5Y5 336 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 NCKAP5O14513 1909 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 PRR14LQ5THK1 2151 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 A0A075B6Q4 140 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 LOC105371242A0A075B767 164 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 A0A087WUU8 490 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 C2orf92A0A1B0GVN3 265 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 A0A1W2PNV4 684 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 TMEM129A0AVI4 362 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 LIPT2A6NK58 231 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 OR6C76A6NM76 312 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 RIIAD1A6NNX1 92 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 LOC110117498-PIK3R3F6TDL0 507 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 SGK494L7N484 410 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 VCYO14598 125 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 MYL12BO14950 172 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 CHP2O43745 196 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 PRKNO60260 465 aaPredicted RBP2.73□□□□□ -1.97
SPG11-225ENST00000561391 FCMRO60667 390 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 RAMP1O60894 148 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 PFDN1O60925 122 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 ENTPD6O75354 484 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 PTP4A3O75365 173 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 APOA1P02647 267 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 C1QCP02747 245 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 MT-ND2P03891 347 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 HLA-DPB1P04440 258 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 IFNA16P05015 189 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 HOXB5P09067 269 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 CSF3P09919 207 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 TSPAN19P0C672 248 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 HSMCR30P0CW71 290 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 CCL3P10147 92 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 DBTP11182 482 aaKnown RBP2.73□□□□□ -1.97
SPG11-225ENST00000561391 HPGDP15428 266 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 RPS4Y1P22090 263 aaKnown RBP2.73□□□□□ -1.97
SPG11-225ENST00000561391 CFL1P23528 166 aaKnown RBP2.73□□□□□ -1.97
SPG11-225ENST00000561391 PTBP1P26599 531 aaKnown RBP eCLIP2.73□□□□□ -1.97
SPG11-225ENST00000561391 GDF1P27539 372 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 HTR1FP30939 366 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 SLC6A6P31641 620 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 SOX3P41225 446 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 MAP3K8P41279 467 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms