RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 SNCBQ16143 134 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 LRRC23Q53EV4 343 aaPredicted RBP4.21□□□□□ -1.74
HERC1-213ENST00000561359 BEND6Q5SZJ8 279 aaPredicted RBP4.21□□□□□ -1.74
HERC1-213ENST00000561359 C10orf128Q5T292 105 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 NXNQ6DKJ4 435 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 C18orf65Q6ZTR6 163 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 RANBP3LQ86VV4 465 aaPredicted RBP4.21□□□□□ -1.74
HERC1-213ENST00000561359 SLC30A8Q8IWU4 369 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 IQCF2Q8IXL9 164 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 RIMKLAQ8IXN7 391 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 RPP25LQ8N5L8 163 aaKnown RBP4.21□□□□□ -1.74
HERC1-213ENST00000561359 FNDC5Q8NAU1 212 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 NOXO1Q8NFA2 376 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 OR5L1Q8NGL2 311 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 OR5D13Q8NGL4 314 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 LZICQ8WZA0 190 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 NABP1Q96AH0 204 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 PPP1R14BQ96C90 147 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 LYZL4Q96KX0 146 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 DUX3Q96PT4 197 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 GPHA2Q96T91 129 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 PAFAH2Q99487 392 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 P2RX4Q99571 388 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 CCL13Q99616 98 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 ERP44Q9BS26 406 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 PARD6BQ9BYG5 372 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 NUF2Q9BZD4 464 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 CALML5Q9NZT1 146 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 H2AFY2Q9P0M6 372 aaPredicted RBP4.21□□□□□ -1.74
HERC1-213ENST00000561359 KAAG1Q9UBP8 84 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 PRSS51A0A1B0GVH4 220 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 A0A1W2PRG6 482 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 A6NLC8 198 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 IQCF6A8MYZ5 107 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 PRR23D1E9PI22 279 aaPredicted RBP4.2□□□□□ -1.74
HERC1-213ENST00000561359 H3BUI4 141 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 DOK2O60496 412 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 MT-ATP6P00846 226 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 C1QCP02747 245 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 HIST1H2ABP04908 130 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 IFNA6P05013 189 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 LPLP06858 475 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 HCKP08631 526 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 SNRPAP09012 282 aaKnown RBP4.2□□□□□ -1.74
HERC1-213ENST00000561359 CST2P09228 141 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 PRR23D2P0DMB1 279 aaPredicted RBP4.2□□□□□ -1.74
HERC1-213ENST00000561359 HTR2AP28223 471 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 CD200P41217 278 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 RANBP1P43487 201 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 CEBPDP49716 269 aaPredicted RBP4.2□□□□□ -1.74
HERC1-213ENST00000561359 CRISP3P54108 245 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 RAD23AP54725 363 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 NCALDP61601 193 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 ELF3P78545 371 aaPredicted RBP4.2□□□□□ -1.74
HERC1-213ENST00000561359 TXNL4AP83876 142 aaKnown RBP4.2□□□□□ -1.74
HERC1-213ENST00000561359 FMODQ06828 376 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 CD47Q08722 323 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 SELPLGQ14242 412 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 HIST3H3Q16695 136 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 MICBQ29980 383 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 GAGE13Q4V321 117 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 LRRC10Q5BKY1 277 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 FAM27BQ5VT28 67 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 ANXA8L1Q5VT79 327 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 HCP5Q6MZN7 132 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 ULK3Q6PHR2 472 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 FBXW12Q6X9E4 464 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 RNF165Q6ZSG1 346 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 HIST3H2AQ7L7L0 130 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 SLC36A1Q7Z2H8 476 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 OR2W3Q7Z3T1 314 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 HDDC2Q7Z4H3 204 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 THNSL2Q86YJ6 484 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 SLC35F6Q8N357 371 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 FAM216BQ8N7L0 139 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 SMYD1Q8NB12 490 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 KLHL30-AS1Q8NEE0 82 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 OR5M8Q8NGP6 311 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 TWIST2Q8WVJ9 160 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 SLC7A6Q92536 515 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 HIST1H2ACQ93077 130 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 RASD2Q96D21 266 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 NAPGQ99747 312 aaPredicted RBP4.2□□□□□ -1.74
HERC1-213ENST00000561359 MRPL13Q9BYD1 178 aaKnown RBP4.2□□□□□ -1.74
HERC1-213ENST00000561359 WDR76Q9H967 626 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 TAS2R5Q9NYW4 299 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 P2RX2Q9UBL9 471 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 SCOCQ9UIL1 159 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 PRPF19Q9UMS4 504 aaKnown RBP4.2□□□□□ -1.74
HERC1-213ENST00000561359 IFT52Q9Y366 437 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 UGT2A1Q9Y4X1 527 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 DNAJC15Q9Y5T4 150 aa4.2□□□□□ -1.74
HERC1-213ENST00000561359 IGKV1D-43A0A0B4J1Z2 117 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 CCDC154A6NI56 674 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 C12orf71A8MTZ7 269 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 CENPBD1B2RD01 187 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 TMEM233B4DJY2 109 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 ANKRD65E5RJM6 399 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 BLOC1S5-TXNDC5H3BN57 136 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 CCL24O00175 119 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms