RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ZNRF1Q8ND25 227 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 OR2L5Q8NG80 312 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 OR10G3Q8NGC4 313 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 OR2A12Q8NGT7 310 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 OR2AE1Q8NHA4 323 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 MFSD8Q8NHS3 518 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 NT5CQ8TCD5 201 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 DTD1Q8TEA8 209 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 C16orf78Q8WTQ4 265 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 RNF138Q8WVD3 245 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 KCTD4Q8WVF5 259 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 RASSF5Q8WWW0 418 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 RAB8BQ92930 207 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 RERGQ96A58 199 aaPredicted RBP1.66□□□□□ -2.14
RTF1-207ENST00000561076 TMEM159Q96B96 161 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 NTNG2Q96CW9 530 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 SMIM19Q96E16 107 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 GMPPAQ96IJ6 420 aaPredicted RBP1.66□□□□□ -2.14
RTF1-207ENST00000561076 PRAC1Q96KF2 57 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 PACRGQ96M98 296 aaPredicted RBP1.66□□□□□ -2.14
RTF1-207ENST00000561076 ZNF681Q96N22 645 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 PGLYRP2Q96PD5 576 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 PITX2Q99697 317 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 GABRG3Q99928 467 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 ATF6BQ99941 703 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 KLHDC3Q9BQ90 382 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 EBF4Q9BQW3 602 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 SULT4A1Q9BR01 284 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 AGMATQ9BSE5 352 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 RIOK2Q9BVS4 552 aaKnown RBP1.66□□□□□ -2.14
RTF1-207ENST00000561076 TAPBPLQ9BX59 468 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 UGT2B28Q9BY64 529 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 SRXN1Q9BYN0 137 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 OR51J1Q9H342 316 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 TRABDQ9H4I3 376 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 PRORYQ9H606 182 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 CLMPQ9H6B4 373 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 JPT2Q9H910 190 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 RGS18Q9NS28 235 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 TAS2R13Q9NYV9 303 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 ZNF629Q9UEG4 869 aaPredicted RBP1.66□□□□□ -2.14
RTF1-207ENST00000561076 PCYOX1Q9UHG3 505 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 OPN4Q9UHM6 478 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 CYB5R1Q9UHQ9 305 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 ANXA10Q9UJ72 324 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 KLHL21Q9UJP4 597 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 RAB26Q9ULW5 256 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 NDRG2Q9UN36 371 aaKnown RBP1.66□□□□□ -2.14
RTF1-207ENST00000561076 TP53TG5Q9Y2B4 290 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 KLF12Q9Y4X4 402 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 HES2Q9Y543 173 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 OR51B2Q9Y5P1 312 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 MTCH2Q9Y6C9 303 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 KIAA0232Q92628 1395 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 PLEKHG1Q9ULL1 1385 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 IFT140Q96RY7 1462 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 FANCD2Q9BXW9 1451 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 ERCC6L2Q5T890 1561 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 ADAMTS20P59510 1910 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 ABCC11Q96J66 1382 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 IGLV7-46A0A075B6I9 117 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 IGLV4-3A0A075B6K6 122 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 IGHV4-30-2A0A087WSY4 118 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 TRAV9-2A0A087WT02 112 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.65□□□□□ -2.15
RTF1-207ENST00000561076 IGHV7-81A0A0B4J1V7 117 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 TRAV39A0A0B4J263 110 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 IGHV2OR16-5A0A0B4J2B6 119 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 A0A0B4J2E0 115 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 LY6G6EA0A0G2JKS1 128 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 A0A1B0GV72 72 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 A0A1B0GX12 115 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 GNG14A0A1W2PPG7 69 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 SRRM3A6NNA2 597 aaPredicted RBP1.65□□□□□ -2.15
RTF1-207ENST00000561076 PMS2P5A8MQ11 134 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 ZNF705EA8MWA4 302 aaPredicted RBP1.65□□□□□ -2.15
RTF1-207ENST00000561076 A8MXK9 166 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 C12orf77C9JDV5 145 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 FAM72CH0Y354 149 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 CXCR6O00574 342 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 SLC17A2O00624 439 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 PHYHO14832 338 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 ZNF780AO75290 641 aaPredicted RBP1.65□□□□□ -2.15
RTF1-207ENST00000561076 MPZL1O95297 269 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 SLC25A27O95847 323 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 FABP3P05413 133 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 HPNP05981 417 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 HOXC4P09017 264 aaPredicted RBP1.65□□□□□ -2.15
RTF1-207ENST00000561076 TACSTD2P09758 323 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 RCC1P18754 421 aaPredicted RBP1.65□□□□□ -2.15
RTF1-207ENST00000561076 MYL12AP19105 171 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 HOXA5P20719 270 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 COX7A1P24310 79 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 IGFBP5P24593 272 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 RPS12P25398 132 aaKnown RBP1.65□□□□□ -2.15
RTF1-207ENST00000561076 LMO2P25791 158 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 PSMB5P28074 263 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 SHC1P29353 583 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 PYCR1P32322 319 aa1.65□□□□□ -2.15
RTF1-207ENST00000561076 GPX4P36969 197 aaPredicted RBP1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms