RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 ASB17Q8WXJ9 295 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 SIGLEC11Q96RL6 698 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 OPA3Q9H6K4 179 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 SP140LQ9H930 580 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 GCM1Q9NP62 436 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 BRD7Q9NPI1 651 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 YAE1D1Q9NRH1 226 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 CLN6Q9NWW5 311 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 ORC6Q9Y5N6 252 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 TMEM14AQ9Y6G1 99 aa12.89□□□□□ -0.35
SNRPA1-213ENST00000560856 GGT3PA6NGU5 568 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 CLDN25C9JDP6 229 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 MAGEB4O15481 346 aaPredicted RBP12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 TBX1O43435 398 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 ZNF254O75437 659 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 SRSF10O75494 262 aaKnown RBP12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 PTBP3O95758 552 aaKnown RBP12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 ANPEPP15144 967 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 ZNF16P17020 682 aaPredicted RBP12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 CA6P23280 308 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 DCTDP32321 178 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 CD200P41217 278 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 GATA4P43694 442 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 MVKQ03426 396 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 TMED1Q13445 227 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 SSX6Q7RTT6 188 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 KRT77Q7Z794 578 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 OR8B12Q8NGG6 310 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 OR51G2Q8NGK0 314 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 SPRYD4Q8WW59 207 aaPredicted RBP12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 STMN2Q93045 179 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 POM121Q96HA1 1249 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 REEP6Q96HR9 211 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 PGAM5Q96HS1 289 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 LYZL4Q96KX0 146 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 MNTQ99583 582 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 APOL4Q9BPW4 351 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 TTTY10Q9BZA0 68 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 OR10A2Q9H208 303 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 NARFLQ9H6Q4 476 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 TMEM106BQ9NUM4 274 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 FAM206AQ9NX38 181 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 MRPL15Q9P015 296 aaKnown RBP12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 AASSQ9UDR5 926 aa12.88□□□□□ -0.35
SNRPA1-213ENST00000560856 ACOD1A6NK06 481 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 A8MV72 311 aaPredicted RBP12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 SLC16A6O15403 523 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 ENTPD6O75354 484 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 APOL3O95236 402 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 PNPP00491 289 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 IGHV2-70P01814 119 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 DDOSTP39656 456 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 SRP9P49458 86 aaKnown RBP12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 GSK3AP49840 483 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 CDH15P55291 814 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 CXCR4P61073 352 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 SLC3A1Q07837 685 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 OR8B8Q15620 311 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 OCLNQ16625 522 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 TIGD6Q17RP2 521 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 ZNF684Q5T5D7 378 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 ZNF322Q6U7Q0 402 aaPredicted RBP12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 CELF2-AS1Q8N7Q2 184 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 RAB1CQ92928 201 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 PPP1R14AQ96A00 147 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 SLC22A4Q9H015 551 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 RGCCQ9H4X1 137 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 FAM118AQ9NWS6 357 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 IMPAD1Q9NX62 359 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 MRM2Q9UI43 246 aaKnown RBP12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 PPP1R3CQ9UQK1 317 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 NPTNQ9Y639 398 aa12.87□□□□□ -0.35
SNRPA1-213ENST00000560856 IGHV3-64DA0A0J9YX35 117 aa12.86□□□□□ -0.35
SNRPA1-213ENST00000560856 LOC100289279A0A1B0GTE1 492 aa12.86□□□□□ -0.35
SNRPA1-213ENST00000560856 FAM157AC9JC47 383 aa12.86□□□□□ -0.35
SNRPA1-213ENST00000560856 TMEM178BH3BS89 294 aa12.86□□□□□ -0.35
SNRPA1-213ENST00000560856 GMDSO60547 372 aa12.86□□□□□ -0.35
SNRPA1-213ENST00000560856 IGLV3-1P01715 115 aa12.86□□□□□ -0.35
SNRPA1-213ENST00000560856 ACKR3P25106 362 aa12.86□□□□□ -0.35
SNRPA1-213ENST00000560856 MMP16P51512 607 aa12.86□□□□□ -0.35
SNRPA1-213ENST00000560856 POU4F2Q12837 409 aa12.86□□□□□ -0.35
SNRPA1-213ENST00000560856 RCN1Q15293 331 aa12.86□□□□□ -0.35
SNRPA1-213ENST00000560856 ZNF181Q2M3W8 571 aa12.86□□□□□ -0.35
SNRPA1-213ENST00000560856 ENTHD1Q8IYW4 607 aa12.86□□□□□ -0.35
SNRPA1-213ENST00000560856 RHOXF1Q8NHV9 184 aa12.86□□□□□ -0.35
SNRPA1-213ENST00000560856 ZNF420Q8TAQ5 688 aaPredicted RBP12.86□□□□□ -0.35
SNRPA1-213ENST00000560856 MROQ9BYG7 248 aa12.86□□□□□ -0.35
SNRPA1-213ENST00000560856 PPP1R3EQ9H7J1 279 aa12.86□□□□□ -0.35
SNRPA1-213ENST00000560856 GMPPBQ9Y5P6 360 aa12.86□□□□□ -0.35
SNRPA1-213ENST00000560856 A0A0U1RQV5 110 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 LOC100130705A0A1B0GUX0 176 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 TMEM269A0A1B0GVZ9 245 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 A0A1W2PQL4 384 aaPredicted RBP12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 ZNF670-ZNF695F2Z2N8 137 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 J3QRE1 110 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 PHYHO14832 338 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 LMX1BO60663 402 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 CRLF1O75462 422 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 TGFAP01135 160 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 IGHV2-5P01817 119 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms