RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 ERGIC1Q969X5 290 aa8.52□□□□□ -1.05
LDLR-214ENST00000560628 CLPTM1LQ96KA5 538 aa8.52□□□□□ -1.05
LDLR-214ENST00000560628 C1orf147Q96MC9 270 aaPredicted RBP8.52□□□□□ -1.05
LDLR-214ENST00000560628 KCNJ15Q99712 375 aa8.52□□□□□ -1.05
LDLR-214ENST00000560628 NIPSNAP1Q9BPW8 284 aa8.52□□□□□ -1.05
LDLR-214ENST00000560628 ADAT1Q9BUB4 502 aaKnown RBP8.52□□□□□ -1.05
LDLR-214ENST00000560628 DGCR6LQ9BY27 220 aa8.52□□□□□ -1.05
LDLR-214ENST00000560628 SLC22A4Q9H015 551 aa8.52□□□□□ -1.05
LDLR-214ENST00000560628 RASSF4Q9H2L5 321 aa8.52□□□□□ -1.05
LDLR-214ENST00000560628 MMADHCQ9H3L0 296 aaPredicted RBP8.52□□□□□ -1.05
LDLR-214ENST00000560628 C1orf123Q9NWV4 160 aa8.52□□□□□ -1.05
LDLR-214ENST00000560628 CLN8Q9UBY8 286 aa8.52□□□□□ -1.05
LDLR-214ENST00000560628 BAIAP2Q9UQB8 552 aa8.52□□□□□ -1.05
LDLR-214ENST00000560628 PCDHGB1Q9Y5G3 927 aa8.52□□□□□ -1.05
LDLR-214ENST00000560628 NBEAL1Q6ZS30 2694 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 TRAV40A0A0B4J280 105 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 MDFIC2A0A1B0GVS7 189 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 DHRS12A0PJE2 317 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 A6NLC8 198 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 RIIAD1A6NNX1 92 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 C22orf46C9J442 243 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 LGALS8O00214 317 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 FSTL3O95633 263 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 IFNGP01579 166 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 ANXA2P07355 339 aaKnown RBP8.51□□□□□ -1.05
LDLR-214ENST00000560628 HKR1P10072 659 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 POU1F1P28069 291 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 CX3CR1P49238 355 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 FGF12P61328 243 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 SLC9A3R2Q15599 337 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 OR8B8Q15620 311 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 PCK2Q16822 640 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 TEX30Q5JUR7 227 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 LINC01590Q5TEZ4 76 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 BRD3OSQ6XYD6 125 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 DPY19L4Q7Z388 723 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 ERI1Q8IV48 349 aaKnown RBP8.51□□□□□ -1.05
LDLR-214ENST00000560628 OR6N2Q8NGY6 317 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 GIPC3Q8TF64 312 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 DACT3Q96B18 629 aaPredicted RBP8.51□□□□□ -1.05
LDLR-214ENST00000560628 SGK3Q96BR1 496 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 UPRTQ96BW1 309 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 CCDC124Q96CT7 223 aaKnown RBP8.51□□□□□ -1.05
LDLR-214ENST00000560628 LRGUKQ96M69 825 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 TECTBQ96PL2 329 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 FEVQ99581 238 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 CHID1Q9BWS9 393 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 OR51V1Q9H2C8 321 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 MUC13Q9H3R2 512 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 PPP1R3EQ9H7J1 279 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 BRD7Q9NPI1 651 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 DNAJC27Q9NZQ0 273 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 MRPL15Q9P015 296 aaKnown RBP8.51□□□□□ -1.05
LDLR-214ENST00000560628 CTSZQ9UBR2 303 aa8.51□□□□□ -1.05
LDLR-214ENST00000560628 NOP16Q9Y3C1 178 aaKnown RBP8.51□□□□□ -1.05
LDLR-214ENST00000560628 IGHV3OR15-7A0A075B7D8 119 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.5□□□□□ -1.05
LDLR-214ENST00000560628 hCG_1807616A0A1W2PRN6 198 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 ANKRD30BLA7E2S9 258 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 ZNF878C9JN71 531 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 H3BN98 237 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 PHYHO14832 338 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 ADAM20O43506 726 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 SPRY1O43609 319 aaPredicted RBP8.5□□□□□ -1.05
LDLR-214ENST00000560628 PLATP00750 562 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 CST1P01037 141 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 GYPAP02724 150 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 PPIAL4GP0DN37 164 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 RAP2AP10114 183 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 ZNF3P17036 446 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 CALB2P22676 271 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 HSD11B1P28845 292 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 GSTT1P30711 240 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 PSMB10P40306 273 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 SLC15A1P46059 708 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 MTNR1AP48039 350 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 BLVRAP53004 296 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 FOXL1Q12952 345 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 TIGD6Q17RP2 521 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 FAM57BQ71RH2 274 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 SLC16A9Q7RTY1 509 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 TMEM179BQ7Z7N9 219 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 SPERTQ8NA61 448 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 CCDC197Q8NCU1 140 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 OR8S1Q8NH09 359 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 TEX47Q8TBZ9 253 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 SLC25A28Q96A46 364 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 REEP6Q96HR9 211 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 INTS14Q96SY0 518 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 AMELYQ99218 206 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 PCGF1Q9BSM1 259 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 THTPAQ9BU02 230 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 ABHD6Q9BV23 337 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 CMC2Q9NRP2 79 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 TNFRSF19Q9NS68 423 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 TAS2R1Q9NYW7 299 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 ZNF319Q9P2F9 582 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 ERVK-18Q9QC07 812 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 DOCK11Q5JSL3 2073 aa8.5□□□□□ -1.05
LDLR-214ENST00000560628 ANK2Q01484 3957 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms