RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 TMEM5Q9Y2B1 443 aa8.65□□□□□ -1.02
CDC42BPB-207ENST00000560492 N6AMT1Q9Y5N5 214 aa8.65□□□□□ -1.02
CDC42BPB-207ENST00000560492 LHFPL6Q9Y693 200 aa8.65□□□□□ -1.02
CDC42BPB-207ENST00000560492 A0A087WUU8 490 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 MEIOCA2RUB1 952 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 FAM220BPB1ANY3 271 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 GSTA4O15217 222 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 RENP00797 406 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 OPN1MWP04001 364 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 ACSM4P0C7M7 580 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 OPN1MW2P0DN77 364 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 OPN1MW3P0DN78 364 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 RPS6KA3P51812 740 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 TPTEP56180 551 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 SELENOWP63302 87 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 COX10Q12887 443 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 TRAP1Q12931 704 aaKnown RBP8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 KLRD1Q13241 179 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 FHL1Q13642 323 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 HERPUD1Q15011 391 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 CDONQ4KMG0 1287 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 SLC35E4Q6ICL7 350 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 CFAP77Q6ZQR2 320 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 C1orf122Q6ZSJ8 110 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 ZNF826PQ6ZT77 177 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 CCDC121Q6ZUS5 278 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 FAM122BQ7Z309 247 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 ADCK1Q86TW2 530 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 NAA40Q86UY6 237 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 CALHM3Q86XJ0 350 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 SLC22A4Q9H015 551 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 ZNRD1Q9P1U0 126 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 RPUSD1Q9UJJ7 312 aaKnown RBP8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 SNX13Q9Y5W8 968 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 KPTNQ9Y664 436 aa8.64□□□□□ -1.03
CDC42BPB-207ENST00000560492 CD300LBA8K4G0 201 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 M0R135 149 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 NPFFO15130 113 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 GMDSO60547 372 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 CCDC22O60826 627 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 TSPAN9O75954 239 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 PPP1R3DO95685 299 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 ZNF26P17031 533 aaPredicted RBP8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 DLX1P56177 255 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 GMFBP60983 142 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 MZT1Q08AG7 82 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 IKZF1Q13422 519 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 LY6EQ16553 131 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 MICBQ29980 383 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 NSUN5P1Q3KNT7 163 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 SLC36A3Q495N2 470 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 IFI44LQ53G44 452 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 PTCHD4Q6ZW05 846 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 TMPRSS11FQ6ZWK6 438 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 TRPM8Q7Z2W7 1104 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 FAM90A1Q86YD7 464 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 LYG1Q8N1E2 194 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 FGFRL1Q8N441 504 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 SPERTQ8NA61 448 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 OR4C13Q8NGP0 309 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 OR8S1Q8NH09 359 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 OR5R1Q8NH85 324 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 OR2AE1Q8NHA4 323 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 SPTSSAQ969W0 71 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 ZNF799Q96GE5 643 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 RSRC1Q96IZ7 334 aaKnown RBP8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 CLPTM1LQ96KA5 538 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 ERMAPQ96PL5 475 aaPredicted RBP8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 CCL13Q99616 98 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 KRCC1Q9NPI7 259 aaPredicted RBP8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 C14orf119Q9NWQ9 140 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 GID8Q9NWU2 228 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 VSX1Q9NZR4 365 aaPredicted RBP8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 FOXJ3Q9UPW0 622 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 SIGLEC9Q9Y336 463 aa8.63□□□□□ -1.03
CDC42BPB-207ENST00000560492 H3BUX3 64 aa8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 BHLHE40O14503 412 aa8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 NDUFB3O43676 98 aa8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 VSIG10L2P0DP72 767 aa8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 ZNF823P16415 610 aa8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 POU1F1P28069 291 aa8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 NOS3P29474 1203 aa8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 GRK5P34947 590 aa8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 CDKN2AP42771 156 aaKnown RBP8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 LOXL3P58215 753 aa8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 TAF13Q15543 124 aa8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 KCNMB1Q16558 191 aa8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 SAMD5Q5TGI4 173 aa8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 SLC36A1Q7Z2H8 476 aa8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 PNKDQ8N490 385 aa8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 SVOPQ8N4V2 548 aa8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 KLHDC1Q8N7A1 406 aa8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 OR2T6Q8NHC8 308 aa8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 NPRL2Q8WTW4 380 aa8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 LRRC29Q8WV35 223 aa8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 PPP1R14AQ96A00 147 aa8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 NKX3-1Q99801 234 aaPredicted RBP8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 FN3KQ9H479 309 aa8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 NRIP3Q9NQ35 241 aa8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 RPRD1BQ9NQG5 326 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms