RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 UCK2Q9BZX2 261 aa3.38□□□□□ -1.87
MARK3-220ENST00000560417 ZYG11BQ9C0D3 744 aa3.38□□□□□ -1.87
MARK3-220ENST00000560417 LYRM4Q9HD34 91 aa3.38□□□□□ -1.87
MARK3-220ENST00000560417 RABL2AQ9UBK7 228 aaPredicted RBP3.38□□□□□ -1.87
MARK3-220ENST00000560417 DUX4Q9UBX2 424 aa3.38□□□□□ -1.87
MARK3-220ENST00000560417 MYO10Q9HD67 2058 aa3.38□□□□□ -1.87
MARK3-220ENST00000560417 PHLPP2Q6ZVD8 1323 aa3.38□□□□□ -1.87
MARK3-220ENST00000560417 MYH3P11055 1940 aa3.37□□□□□ -1.87
MARK3-220ENST00000560417 DICER1Q9UPY3 1922 aaKnown RBP3.37□□□□□ -1.87
MARK3-220ENST00000560417 IGLV1-50A0A075B6I6 118 aa3.37□□□□□ -1.87
MARK3-220ENST00000560417 NCBP2LA6PVI3 153 aaKnown RBP3.37□□□□□ -1.87
MARK3-220ENST00000560417 H0YIV9 168 aa3.37□□□□□ -1.87
MARK3-220ENST00000560417 RAD51CO43502 376 aa3.37□□□□□ -1.87
MARK3-220ENST00000560417 CCNB2O95067 398 aa3.37□□□□□ -1.87
MARK3-220ENST00000560417 FGFR1OPO95684 399 aaKnown RBP3.37□□□□□ -1.87
MARK3-220ENST00000560417 PRB2P02812 416 aaPredicted RBP3.37□□□□□ -1.87
MARK3-220ENST00000560417 IGHV1-8P0DP01 117 aa3.37□□□□□ -1.87
MARK3-220ENST00000560417 IGFBP3P17936 291 aaPredicted RBP3.37□□□□□ -1.87
MARK3-220ENST00000560417 GGT1P19440 569 aa3.37□□□□□ -1.87
MARK3-220ENST00000560417 WARSP23381 471 aaKnown RBP3.37□□□□□ -1.87
MARK3-220ENST00000560417 HMOX2P30519 316 aa3.37□□□□□ -1.87
MARK3-220ENST00000560417 ESRRGP62508 458 aa3.37□□□□□ -1.87
MARK3-220ENST00000560417 ARG2P78540 354 aa3.37□□□□□ -1.87
MARK3-220ENST00000560417 SEMG2Q02383 582 aa3.37□□□□□ -1.87
MARK3-220ENST00000560417 UBE2SQ16763 222 aa3.37□□□□□ -1.87
MARK3-220ENST00000560417 STUMQ69YW2 141 aa3.37□□□□□ -1.87
MARK3-220ENST00000560417 KATNAL2Q8IYT4 538 aa3.37□□□□□ -1.87
MARK3-220ENST00000560417 OR10AD1Q8NGE0 317 aa3.37□□□□□ -1.87
MARK3-220ENST00000560417 OR56A4Q8NGH8 313 aa3.37□□□□□ -1.87
MARK3-220ENST00000560417 OR5W2Q8NH69 310 aa3.37□□□□□ -1.87
MARK3-220ENST00000560417 AGR3Q8TD06 166 aa3.37□□□□□ -1.87
MARK3-220ENST00000560417 NCOR1P1Q9H4R4 102 aa3.37□□□□□ -1.87
MARK3-220ENST00000560417 TMEM38AQ9H6F2 299 aa3.37□□□□□ -1.87
MARK3-220ENST00000560417 SYNDIG1Q9H7V2 258 aa3.37□□□□□ -1.87
MARK3-220ENST00000560417 PDP1Q9P0J1 537 aaPredicted RBP3.37□□□□□ -1.87
MARK3-220ENST00000560417 IBTKQ9P2D0 1353 aaPredicted RBP3.37□□□□□ -1.87
MARK3-220ENST00000560417 SCN9AQ15858 1988 aa3.36□□□□□ -1.87
MARK3-220ENST00000560417 ADAMTSL1Q8N6G6 1762 aa3.36□□□□□ -1.87
MARK3-220ENST00000560417 ENTPD5O75356 428 aa3.36□□□□□ -1.87
MARK3-220ENST00000560417 ZNF32P17041 273 aa3.36□□□□□ -1.87
MARK3-220ENST00000560417 PGAM1P18669 254 aa3.36□□□□□ -1.87
MARK3-220ENST00000560417 RGS19P49795 217 aa3.36□□□□□ -1.87
MARK3-220ENST00000560417 RAP1AP62834 184 aa3.36□□□□□ -1.87
MARK3-220ENST00000560417 IRF8Q02556 426 aa3.36□□□□□ -1.87
MARK3-220ENST00000560417 RCAN2Q14206 197 aa3.36□□□□□ -1.87
MARK3-220ENST00000560417 NTM-AS1Q6ZSK4 140 aa3.36□□□□□ -1.87
MARK3-220ENST00000560417 PGAM4Q8N0Y7 254 aa3.36□□□□□ -1.87
MARK3-220ENST00000560417 C8orf31Q8N9H6 132 aa3.36□□□□□ -1.87
MARK3-220ENST00000560417 OR52E5Q8NH55 327 aa3.36□□□□□ -1.87
MARK3-220ENST00000560417 TMEM230Q96A57 120 aa3.36□□□□□ -1.87
MARK3-220ENST00000560417 C12orf10Q9HB07 376 aa3.36□□□□□ -1.87
MARK3-220ENST00000560417 CCNB1IP1Q9NPC3 277 aa3.36□□□□□ -1.87
MARK3-220ENST00000560417 AGPAT4Q9NRZ5 378 aa3.36□□□□□ -1.87
MARK3-220ENST00000560417 FAM49BQ9NUQ9 324 aa3.36□□□□□ -1.87
MARK3-220ENST00000560417 TRMT112Q9UI30 125 aaKnown RBP3.36□□□□□ -1.87
MARK3-220ENST00000560417 A6NDN8 102 aa3.35□□□□□ -1.87
MARK3-220ENST00000560417 LRRIQ4A6NIV6 560 aa3.35□□□□□ -1.87
MARK3-220ENST00000560417 ZNF324O75467 553 aaPredicted RBP3.35□□□□□ -1.87
MARK3-220ENST00000560417 CD3GP09693 182 aa3.35□□□□□ -1.87
MARK3-220ENST00000560417 TNFSF9P41273 254 aa3.35□□□□□ -1.87
MARK3-220ENST00000560417 PFN3P60673 137 aa3.35□□□□□ -1.87
MARK3-220ENST00000560417 CDH17Q12864 832 aa3.35□□□□□ -1.87
MARK3-220ENST00000560417 METTL21CQ5VZV1 264 aa3.35□□□□□ -1.87
MARK3-220ENST00000560417 TMEM205Q6UW68 189 aa3.35□□□□□ -1.87
MARK3-220ENST00000560417 MBOAT2Q6ZWT7 520 aa3.35□□□□□ -1.87
MARK3-220ENST00000560417 JAGN1Q8N5M9 183 aa3.35□□□□□ -1.87
MARK3-220ENST00000560417 C11orf72Q8NBR9 251 aa3.35□□□□□ -1.87
MARK3-220ENST00000560417 BBOF1Q8ND07 529 aa3.35□□□□□ -1.87
MARK3-220ENST00000560417 OR52E2Q8NGJ4 325 aa3.35□□□□□ -1.87
MARK3-220ENST00000560417 NTAN1Q96AB6 310 aa3.35□□□□□ -1.87
MARK3-220ENST00000560417 TM4SF18Q96CE8 201 aa3.35□□□□□ -1.87
MARK3-220ENST00000560417 FOPNLQ96NB1 174 aa3.35□□□□□ -1.87
MARK3-220ENST00000560417 SLC7A5P2Q9GIP4 190 aa3.35□□□□□ -1.87
MARK3-220ENST00000560417 PATZ1Q9HBE1 687 aaKnown RBP3.35□□□□□ -1.87
MARK3-220ENST00000560417 DDX18Q9NVP1 670 aaKnown RBP3.35□□□□□ -1.87
MARK3-220ENST00000560417 CLN6Q9NWW5 311 aa3.35□□□□□ -1.87
MARK3-220ENST00000560417 ZNF222Q9UK12 451 aa3.35□□□□□ -1.87
MARK3-220ENST00000560417 RCL1Q9Y2P8 373 aaKnown RBP3.35□□□□□ -1.87
MARK3-220ENST00000560417 MROH7-TTC4A0A0A0MT08 1334 aa3.35□□□□□ -1.87
MARK3-220ENST00000560417 TTC41PQ6P2S7 1318 aa3.35□□□□□ -1.87
MARK3-220ENST00000560417 WDR90Q96KV7 1748 aa3.35□□□□□ -1.87
MARK3-220ENST00000560417 H7C0C1 242 aa3.34□□□□□ -1.87
MARK3-220ENST00000560417 SLC9A3R1O14745 358 aaPredicted RBP3.34□□□□□ -1.87
MARK3-220ENST00000560417 CASC3O15234 703 aaKnown RBP3.34□□□□□ -1.87
MARK3-220ENST00000560417 MED6O75586 246 aa3.34□□□□□ -1.87
MARK3-220ENST00000560417 SLC25A14O95258 325 aaPredicted RBP3.34□□□□□ -1.87
MARK3-220ENST00000560417 OXTP01178 125 aa3.34□□□□□ -1.87
MARK3-220ENST00000560417 HLA-HP01893 362 aa3.34□□□□□ -1.87
MARK3-220ENST00000560417 HBE1P02100 147 aa3.34□□□□□ -1.87
MARK3-220ENST00000560417 EIF4EP06730 217 aaKnown RBP3.34□□□□□ -1.87
MARK3-220ENST00000560417 CTSLP07711 333 aa3.34□□□□□ -1.87
MARK3-220ENST00000560417 CLTAP09496 248 aa3.34□□□□□ -1.87
MARK3-220ENST00000560417 TCN2P20062 427 aa3.34□□□□□ -1.87
MARK3-220ENST00000560417 U2AF2P26368 475 aaKnown RBP eCLIP3.34□□□□□ -1.872e-7■■□□□ 11.5
MARK3-220ENST00000560417 VSX2P58304 361 aaPredicted RBP3.34□□□□□ -1.87
MARK3-220ENST00000560417 LOXL1Q08397 574 aaPredicted RBP3.34□□□□□ -1.87
MARK3-220ENST00000560417 SLAQ13239 276 aa3.34□□□□□ -1.87
MARK3-220ENST00000560417 PTGES3Q15185 160 aaKnown RBP3.34□□□□□ -1.87
MARK3-220ENST00000560417 IRF4Q15306 451 aa3.34□□□□□ -1.87
MARK3-220ENST00000560417 CHRFAM7AQ494W8 412 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms