RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 SPHARQ15513 63 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 SLC25A35Q3KQZ1 300 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 KRTAP27-1Q3LI81 207 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 SLC36A2Q495M3 483 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 ARMCX4Q5H9R4 360 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 GLYATL3Q5SZD4 288 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 FAM27D1Q5T7N8 215 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 GPR107Q5VW38 600 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 FOXB2Q5VYV0 432 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 TMEM53Q6P2H8 277 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 PRSS45Q7RTY3 260 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 FAM220AQ7Z4H9 259 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 ZNF679Q8IYX0 411 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 C1orf162Q8NEQ5 155 aaPredicted RBP4.5□□□□□ -1.69
SPG11-220ENST00000559933 SLC30A7Q8NEW0 376 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 GJC3Q8NFK1 279 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 OR8B12Q8NGG6 310 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 OR13F1Q8NGS4 319 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 OR2G2Q8NGZ5 317 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 OR52N1Q8NH53 320 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 LILRB4Q8NHJ6 448 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 ASB17Q8WXJ9 295 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 NEUROG1Q92886 237 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 DVL3Q92997 716 aaPredicted RBP4.5□□□□□ -1.69
SPG11-220ENST00000559933 ZNF799Q96GE5 643 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 POM121L2Q96KW2 1035 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 PGLYRP3Q96LB9 341 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 C4orf45Q96LM5 186 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 WFIKKN1Q96NZ8 548 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 MGLLQ99685 303 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 DOK1Q99704 481 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 MROQ9BYG7 248 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 OR51E2Q9H255 320 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 KCNN2Q9H2S1 579 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 G6PC2Q9NQR9 355 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 INPP5EQ9NRR6 644 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 DDX28Q9NUL7 540 aaKnown RBP4.5□□□□□ -1.69
SPG11-220ENST00000559933 CHCHD3Q9NX63 227 aaKnown RBP4.5□□□□□ -1.69
SPG11-220ENST00000559933 BABAM2Q9NXR7 383 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 PTTG3PQ9NZH4 202 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 SCOCQ9UIL1 159 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 CAB39Q9Y376 341 aaPredicted RBP4.5□□□□□ -1.69
SPG11-220ENST00000559933 TIMM10BQ9Y5J6 103 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 R4GMQ9 66 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 RTTNQ86VV8 2226 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 IGHV2OR16-5A0A0B4J2B6 119 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 TMEM269A0A1B0GVZ9 245 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 LOC107986453A0A1B0GWG9 222 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 A0A1W2PPK0 400 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 DPPA5A6NC42 116 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 DPRXA6NFQ7 191 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 ANKRD61A6NGH8 418 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 ACOD1A6NK06 481 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 LOC110117498-PIK3R3F6TDL0 507 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 PHYHO14832 338 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 SMPD2O60906 423 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 TMCC2O75069 709 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 GPX5O75715 221 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 SULT1C4O75897 302 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 ZFPL1O95159 310 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 CNOT4O95628 575 aaKnown RBP4.49□□□□□ -1.69
SPG11-220ENST00000559933 CLDN1O95832 211 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 PLAUP00749 431 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 IGKV3-15P01624 115 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 IGLV1-44P01699 117 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 TTRP02766 147 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 LCATP04180 440 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 CBR1P16152 277 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 CD36P16671 472 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 CELP19835 753 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 OTX1P32242 354 aaPredicted RBP4.49□□□□□ -1.69
SPG11-220ENST00000559933 APLNRP35414 380 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 MPV17P39210 176 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 SOX2P48431 317 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 GDI2P50395 445 aaKnown RBP4.49□□□□□ -1.69
SPG11-220ENST00000559933 GBX2P52951 348 aaPredicted RBP4.49□□□□□ -1.69
SPG11-220ENST00000559933 PCBD1P61457 104 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 GRB2P62993 217 aaKnown RBP4.49□□□□□ -1.69
SPG11-220ENST00000559933 FABP5Q01469 135 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 NAAAQ02083 359 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 TGFBR3Q03167 851 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 BSPH1Q075Z2 132 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 MLLT11Q13015 90 aaPredicted RBP4.49□□□□□ -1.69
SPG11-220ENST00000559933 ALKBH1Q13686 389 aaKnown RBP4.49□□□□□ -1.69
SPG11-220ENST00000559933 HLXQ14774 488 aaPredicted RBP4.49□□□□□ -1.69
SPG11-220ENST00000559933 ALKBH6Q3KRA9 238 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 NRN1LQ496H8 165 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 TIMM23BQ5SRD1 257 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 BCL2L15Q5TBC7 163 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 RNLSQ5VYX0 342 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 HIST2H2BCQ6DN03 193 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 DMKNQ6E0U4 476 aaPredicted RBP4.49□□□□□ -1.69
SPG11-220ENST00000559933 ADAM5Q6NVV9 412 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 KCTD18Q6PI47 426 aaPredicted RBP4.49□□□□□ -1.69
SPG11-220ENST00000559933 TMPRSS11AQ6ZMR5 421 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 SLC16A12Q6ZSM3 486 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 RNF144BQ7Z419 303 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 COMMD2Q86X83 199 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 CATSPERDQ86XM0 798 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms