RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 ACSM4P0C7M7 580 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 DUX4L2P0CJ85 424 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 DUX4L3P0CJ86 424 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 DUX4L4P0CJ87 422 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 DUX4L5P0CJ88 424 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 DUX4L6P0CJ89 424 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 DUX4L7P0CJ90 424 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 SLC6A6P31641 620 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 GGT2P36268 569 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 CDKN2AP42771 156 aaKnown RBP12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 OMPP47874 163 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 ELF3P78545 371 aaPredicted RBP12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 TRAP1Q12931 704 aaKnown RBP12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 VAX1Q5SQQ9 334 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 SLC18B1Q6NT16 456 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 CGB2Q6NT52 195 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 DUX4L9Q6RFH8 374 aaPredicted RBP12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 CFAP77Q6ZQR2 320 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 VMO1Q7Z5L0 202 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 LINC00346Q8IVM7 164 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 SLC15A3Q8IY34 581 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 BOLLQ8N9W6 283 aaKnown RBP12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 SPTSSAQ969W0 71 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 TSSK2Q96PF2 358 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 KCTD14Q9BQ13 255 aaPredicted RBP12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 NSRP1Q9H0G5 558 aaKnown RBP12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 DPAGT1Q9H3H5 408 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 SRA1Q9HD15 236 aaKnown RBP12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 GMPR2Q9P2T1 348 aaKnown RBP12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 DUX4Q9UBX2 424 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 B9D1Q9UPM9 204 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 GMNNO75496 209 aa12.81□□□□□ -0.36
AC243562.3-201ENST00000559866 RHCEP18577 417 aa12.81□□□□□ -0.36
AC243562.3-201ENST00000559866 ANOS1P23352 680 aa12.81□□□□□ -0.36
AC243562.3-201ENST00000559866 NOS3P29474 1203 aa12.81□□□□□ -0.36
AC243562.3-201ENST00000559866 GSK3BP49841 420 aa12.81□□□□□ -0.36
AC243562.3-201ENST00000559866 MZT1Q08AG7 82 aa12.81□□□□□ -0.36
AC243562.3-201ENST00000559866 KRTAP27-1Q3LI81 207 aa12.81□□□□□ -0.36
AC243562.3-201ENST00000559866 C1orf122Q6ZSJ8 110 aa12.81□□□□□ -0.36
AC243562.3-201ENST00000559866 BTN2A1Q7KYR7 527 aa12.81□□□□□ -0.36
AC243562.3-201ENST00000559866 PNKDQ8N490 385 aa12.81□□□□□ -0.36
AC243562.3-201ENST00000559866 SLC26A10Q8NG04 563 aa12.81□□□□□ -0.36
AC243562.3-201ENST00000559866 PPP1R35Q8TAP8 253 aa12.81□□□□□ -0.36
AC243562.3-201ENST00000559866 CFHR4Q92496 578 aa12.81□□□□□ -0.36
AC243562.3-201ENST00000559866 PPA2Q9H2U2 334 aa12.81□□□□□ -0.36
AC243562.3-201ENST00000559866 RPRD1BQ9NQG5 326 aaKnown RBP12.81□□□□□ -0.36
AC243562.3-201ENST00000559866 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.81□□□□□ -0.36
AC243562.3-201ENST00000559866 SAMD4AQ9UPU9 718 aaKnown RBP12.81□□□□□ -0.36
AC243562.3-201ENST00000559866 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 A0A1W2PRD5 423 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 A0A1W2PRF3 423 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 A0A1W2PRM7 423 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 MEGF11A6BM72 1044 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 OOEPA6NGQ2 149 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 GGT3PA6NGU5 568 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 M0R135 149 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 DCTN6O00399 190 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 NME4O00746 187 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 GMDSO60547 372 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 GYPAP02724 150 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 ZNF823P16415 610 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 CA6P23280 308 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 EFNB2P52799 333 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 FXYD6P3P58550 94 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 POU4F2Q12837 409 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 KLRD1Q13241 179 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 RSPO1Q2MKA7 263 aaPredicted RBP12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 OR6V1Q8N148 313 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 SPERTQ8NA61 448 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 PLPP7Q8NBV4 271 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 LRTOMTQ8WZ04 291 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 PHF21AQ96BD5 680 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 ZNF799Q96GE5 643 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 NMNAT3Q96T66 252 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 IFT27Q9BW83 186 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 OR52D1Q9H346 318 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 NECAP2Q9NVZ3 263 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 NDUFAF4Q9P032 175 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 DNAJB11Q9UBS4 358 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 KCNG2Q9UJ96 466 aa12.8□□□□□ -0.36
AC243562.3-201ENST00000559866 TRBV4-1A0A0J9YWV2 114 aa12.79□□□□□ -0.36
AC243562.3-201ENST00000559866 hCG_1807616A0A1W2PRN6 198 aa12.79□□□□□ -0.36
AC243562.3-201ENST00000559866 A6NLC8 198 aa12.79□□□□□ -0.36
AC243562.3-201ENST00000559866 CD300LBA8K4G0 201 aa12.79□□□□□ -0.36
AC243562.3-201ENST00000559866 RNASEK-C17orf49H0YIS7 233 aa12.79□□□□□ -0.36
AC243562.3-201ENST00000559866 DVL1O14640 695 aa12.79□□□□□ -0.36
AC243562.3-201ENST00000559866 ARPC3O15145 178 aa12.79□□□□□ -0.36
AC243562.3-201ENST00000559866 ECDO95905 644 aaPredicted RBP12.79□□□□□ -0.36
AC243562.3-201ENST00000559866 NCK1P16333 377 aa12.79□□□□□ -0.36
AC243562.3-201ENST00000559866 SMIM11AP58511 58 aa12.79□□□□□ -0.36
AC243562.3-201ENST00000559866 GNGT1P63211 74 aa12.79□□□□□ -0.36
AC243562.3-201ENST00000559866 RFX4Q33E94 735 aa12.79□□□□□ -0.36
AC243562.3-201ENST00000559866 C11orf91Q3C1V1 193 aa12.79□□□□□ -0.36
AC243562.3-201ENST00000559866 CCBE1Q6UXH8 406 aaPredicted RBP12.79□□□□□ -0.36
AC243562.3-201ENST00000559866 Q6ZTK2 550 aa12.79□□□□□ -0.36
AC243562.3-201ENST00000559866 TSEN54Q7Z6J9 526 aaKnown RBP12.79□□□□□ -0.36
AC243562.3-201ENST00000559866 OR4C15Q8NGM1 316 aa12.79□□□□□ -0.36
AC243562.3-201ENST00000559866 OR4K13Q8NH42 304 aa12.79□□□□□ -0.36
AC243562.3-201ENST00000559866 OR52J3Q8NH60 311 aa12.79□□□□□ -0.36
AC243562.3-201ENST00000559866 EFCAB1Q9HAE3 211 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms