RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 OR5H8P0DN80 308 aa2.58□□□□□ -2
SPG11-218ENST00000559754 TCP1P17987 556 aaKnown RBP2.58□□□□□ -2
SPG11-218ENST00000559754 WARSP23381 471 aaKnown RBP2.58□□□□□ -2
SPG11-218ENST00000559754 GDF1P27539 372 aa2.58□□□□□ -2
SPG11-218ENST00000559754 HOXA9P31269 272 aa2.58□□□□□ -2
SPG11-218ENST00000559754 PRKAR2BP31323 418 aa2.58□□□□□ -2
SPG11-218ENST00000559754 MAGEA3P43357 314 aa2.58□□□□□ -2
SPG11-218ENST00000559754 HAAOP46952 286 aa2.58□□□□□ -2
SPG11-218ENST00000559754 RGS6P49758 472 aa2.58□□□□□ -2
SPG11-218ENST00000559754 MEOX2P50222 304 aa2.58□□□□□ -2
SPG11-218ENST00000559754 UBE2E1P51965 193 aa2.58□□□□□ -2
SPG11-218ENST00000559754 VSX2P58304 361 aaPredicted RBP2.58□□□□□ -2
SPG11-218ENST00000559754 MLF1P58340 268 aa2.58□□□□□ -2
SPG11-218ENST00000559754 C2orf54Q08AI8 447 aa2.58□□□□□ -2
SPG11-218ENST00000559754 MED21Q13503 144 aa2.58□□□□□ -2
SPG11-218ENST00000559754 KYAT1Q16773 422 aa2.58□□□□□ -2
SPG11-218ENST00000559754 FAM27D1Q5T7N8 215 aa2.58□□□□□ -2
SPG11-218ENST00000559754 RESP18Q5W5W9 173 aa2.58□□□□□ -2
SPG11-218ENST00000559754 C8orf74Q6P047 294 aa2.58□□□□□ -2
SPG11-218ENST00000559754 CLEC18BQ6UXF7 455 aa2.58□□□□□ -2
SPG11-218ENST00000559754 FAM19A1Q7Z5A9 133 aa2.58□□□□□ -2
SPG11-218ENST00000559754 HSD17B13Q7Z5P4 300 aaPredicted RBP2.58□□□□□ -2
SPG11-218ENST00000559754 MRPL52Q86TS9 123 aaKnown RBP2.58□□□□□ -2
SPG11-218ENST00000559754 OAFQ86UD1 273 aa2.58□□□□□ -2
SPG11-218ENST00000559754 LRRC52Q8N7C0 313 aa2.58□□□□□ -2
SPG11-218ENST00000559754 OR51G1Q8NGK1 321 aa2.58□□□□□ -2
SPG11-218ENST00000559754 OR10G9Q8NGN4 311 aa2.58□□□□□ -2
SPG11-218ENST00000559754 OR5AK3PQ8NH89 298 aa2.58□□□□□ -2
SPG11-218ENST00000559754 PHF10Q8WUB8 498 aaKnown RBP2.58□□□□□ -2
SPG11-218ENST00000559754 FAM3DQ96BQ1 224 aa2.58□□□□□ -2
SPG11-218ENST00000559754 SGTBQ96EQ0 304 aa2.58□□□□□ -2
SPG11-218ENST00000559754 UBE2E2Q96LR5 201 aa2.58□□□□□ -2
SPG11-218ENST00000559754 UQCC2Q9BRT2 126 aa2.58□□□□□ -2
SPG11-218ENST00000559754 DCUN1D5Q9BTE7 237 aa2.58□□□□□ -2
SPG11-218ENST00000559754 ZNF426Q9BUY5 554 aa2.58□□□□□ -2
SPG11-218ENST00000559754 DEFB126Q9BYW3 111 aa2.58□□□□□ -2
SPG11-218ENST00000559754 WDR55Q9H6Y2 383 aaPredicted RBP2.58□□□□□ -2
SPG11-218ENST00000559754 LRRC19Q9H756 370 aa2.58□□□□□ -2
SPG11-218ENST00000559754 PTGES2Q9H7Z7 377 aa2.58□□□□□ -2
SPG11-218ENST00000559754 PSTPIP2Q9H939 334 aa2.58□□□□□ -2
SPG11-218ENST00000559754 TREX1Q9NSU2 369 aa2.58□□□□□ -2
SPG11-218ENST00000559754 VNN3Q9NY84 501 aa2.58□□□□□ -2
SPG11-218ENST00000559754 ZNF629Q9UEG4 869 aaPredicted RBP2.58□□□□□ -2
SPG11-218ENST00000559754 CEMIPQ8WUJ3 1361 aa2.58□□□□□ -2
SPG11-218ENST00000559754 KIAA0232Q92628 1395 aa2.58□□□□□ -2
SPG11-218ENST00000559754 ADAMTSL3P82987 1691 aa2.57□□□□□ -2
SPG11-218ENST00000559754 IGLV1-36A0A0B4J1U3 117 aa2.57□□□□□ -2
SPG11-218ENST00000559754 IGHV2OR16-5A0A0B4J2B6 119 aa2.57□□□□□ -2
SPG11-218ENST00000559754 KLF18A0A0U1RQI7 1052 aa2.57□□□□□ -2
SPG11-218ENST00000559754 GOLGA8JA6NMD2 632 aa2.57□□□□□ -2
SPG11-218ENST00000559754 SULT1C2O00338 296 aa2.57□□□□□ -2
SPG11-218ENST00000559754 CRXO43186 299 aaPredicted RBP2.57□□□□□ -2
SPG11-218ENST00000559754 RCBTB2O95199 551 aa2.57□□□□□ -2
SPG11-218ENST00000559754 RAB3DO95716 219 aa2.57□□□□□ -2
SPG11-218ENST00000559754 TTC4O95801 387 aa2.57□□□□□ -2
SPG11-218ENST00000559754 KRT7P08729 469 aa2.57□□□□□ -2
SPG11-218ENST00000559754 GOLGA8HP0CJ92 632 aa2.57□□□□□ -2
SPG11-218ENST00000559754 PET100P0DJ07 73 aa2.57□□□□□ -2
SPG11-218ENST00000559754 GIMD1P0DJR0 217 aa2.57□□□□□ -2
SPG11-218ENST00000559754 IGHV3-43DP0DP04 118 aa2.57□□□□□ -2
SPG11-218ENST00000559754 LIPCP11150 499 aa2.57□□□□□ -2
SPG11-218ENST00000559754 ICAM2P13598 275 aa2.57□□□□□ -2
SPG11-218ENST00000559754 HLA-GP17693 338 aa2.57□□□□□ -2
SPG11-218ENST00000559754 RAB3BP20337 219 aa2.57□□□□□ -2
SPG11-218ENST00000559754 MYL9P24844 172 aa2.57□□□□□ -2
SPG11-218ENST00000559754 HOXA6P31267 233 aa2.57□□□□□ -2
SPG11-218ENST00000559754 CEACAM3P40198 252 aa2.57□□□□□ -2
SPG11-218ENST00000559754 MAGEA2P43356 314 aa2.57□□□□□ -2
SPG11-218ENST00000559754 PPICP45877 212 aa2.57□□□□□ -2
SPG11-218ENST00000559754 HCAR3P49019 387 aa2.57□□□□□ -2
SPG11-218ENST00000559754 CDC34P49427 236 aaPredicted RBP2.57□□□□□ -2
SPG11-218ENST00000559754 RPL14P50914 215 aaKnown RBP2.57□□□□□ -2
SPG11-218ENST00000559754 FGF8P55075 233 aaPredicted RBP2.57□□□□□ -2
SPG11-218ENST00000559754 PRPS1P60891 318 aa2.57□□□□□ -2
SPG11-218ENST00000559754 MAGOHP61326 146 aaKnown RBP2.57□□□□□ -2
SPG11-218ENST00000559754 ZNF45Q02386 682 aa2.57□□□□□ -2
SPG11-218ENST00000559754 TCP10Q12799 353 aa2.57□□□□□ -2
SPG11-218ENST00000559754 FLOT2Q14254 428 aa2.57□□□□□ -2
SPG11-218ENST00000559754 PRPSAP1Q14558 356 aa2.57□□□□□ -2
SPG11-218ENST00000559754 PSG5Q15238 335 aa2.57□□□□□ -2
SPG11-218ENST00000559754 POU2AF1Q16633 256 aa2.57□□□□□ -2
SPG11-218ENST00000559754 EXOC3L4Q17RC7 722 aa2.57□□□□□ -2
SPG11-218ENST00000559754 COA6Q5JTJ3 125 aaKnown RBP2.57□□□□□ -2
SPG11-218ENST00000559754 THEM4Q5T1C6 240 aa2.57□□□□□ -2
SPG11-218ENST00000559754 IDNKQ5T6J7 187 aa2.57□□□□□ -2
SPG11-218ENST00000559754 LCN12Q6JVE5 192 aa2.57□□□□□ -2
SPG11-218ENST00000559754 CGB2Q6NT52 195 aa2.57□□□□□ -2
SPG11-218ENST00000559754 RFLNAQ6ZTI6 216 aa2.57□□□□□ -2
SPG11-218ENST00000559754 DCXRQ7Z4W1 244 aa2.57□□□□□ -2
SPG11-218ENST00000559754 RAB43Q86YS6 212 aa2.57□□□□□ -2
SPG11-218ENST00000559754 ZFP41Q8N8Y5 198 aa2.57□□□□□ -2
SPG11-218ENST00000559754 OR8J2Q8NGG1 315 aa2.57□□□□□ -2
SPG11-218ENST00000559754 ZFAND1Q8TCF1 268 aa2.57□□□□□ -2
SPG11-218ENST00000559754 ZFP90Q8TF47 636 aa2.57□□□□□ -2
SPG11-218ENST00000559754 GTSF1Q8WW33 167 aa2.57□□□□□ -2
SPG11-218ENST00000559754 ING5Q8WYH8 240 aa2.57□□□□□ -2
SPG11-218ENST00000559754 ADTRPQ96IZ2 230 aa2.57□□□□□ -2
SPG11-218ENST00000559754 RNF145Q96MT1 663 aa2.57□□□□□ -2
SPG11-218ENST00000559754 HBEGFQ99075 208 aa2.57□□□□□ -2
SPG11-218ENST00000559754 RASL11BQ9BPW5 248 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms