RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 AUNIPQ9H7T9 357 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 KCNJ16Q9NPI9 418 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 SPTBN1Q01082 2364 aaKnown RBP9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 M0R1B8 84 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 NTN3O00634 580 aaPredicted RBP9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 CDC42EP2O14613 210 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 CDX4O14627 284 aaPredicted RBP9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 SURF4O15260 269 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 FBXO24O75426 580 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 FAM157BP0CG42 384 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 AMY2BP19961 511 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 GRB2P62993 217 aaKnown RBP9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 DEFA6Q01524 100 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 TRAPPC6BQ86SZ2 158 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 OR5AS1Q8N127 324 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 C9orf62Q8N4C0 152 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 PPP1R35Q8TAP8 253 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 GCDHQ92947 438 aaPredicted RBP9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 TRAF4Q9BUZ4 470 aaPredicted RBP9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 PBDC1Q9BVG4 233 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 MIXL1Q9H2W2 232 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 PIGMQ9H3S5 423 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 IFT22Q9H7X7 185 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 ISG20L2Q9H9L3 353 aaKnown RBP9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 HRASLSQ9HDD0 168 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 KCNG2Q9UJ96 466 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 A0A1W2PR80 420 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 M0R135 149 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 SRMP19623 302 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 PPT1P50897 306 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 FABP6P51161 128 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 MZT1Q08AG7 82 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 CHRFAM7AQ494W8 412 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 FAM74A1Q5RGS3 127 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 LAIR2Q6ISS4 152 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 THSD4Q6ZMP0 1018 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 OR13C5Q8NGS8 318 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 ZNF799Q96GE5 643 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 PRRT1Q99946 306 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 AICDAQ9GZX7 198 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 SLC52A3Q9NQ40 469 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 OR14J1Q9UGF5 321 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 KCNIP3Q9Y2W7 256 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 ATP23Q9Y6H3 246 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 TUBAL3A6NHL2 446 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 CX3CR1P49238 355 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 HMGA2P52926 109 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 MVDP53602 400 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 ARF1P84077 181 aaKnown RBP9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 LCN10Q6JVE6 187 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 C17orf82Q86X59 251 aaPredicted RBP9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 ACBD4Q8NC06 268 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 FDCSPQ8NFU4 85 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 SLC25A19Q9HC21 320 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 ZNF850A8MQ14 1090 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 TRAPPC2LH3BP13 241 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 H7C417 338 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 SERPINA5P05154 406 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 OR8U9P0C7N5 309 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 EDN3P14138 238 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 GABRA1P14867 456 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 TUBG1P23258 451 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 ST3GAL2Q16842 350 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 C12orf73Q69YU5 71 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 STEAP1BQ6NZ63 245 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 ATG4DQ86TL0 474 aaPredicted RBP9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 OR51S1Q8NGJ8 323 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 OR4Q3Q8NH05 313 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 FLVCR1-AS1Q8TAF5 88 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 OIT3Q8WWZ8 545 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 CLCC1Q96S66 551 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 TTTY12Q9BZ98 90 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 PRELID3BQ9Y3B1 194 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 MYLKQ15746 1914 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 A0A1B0GTH9 108 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 TSPAN2O60636 221 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 KNG1P01042 644 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 SERPINA2P20848 420 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 ARR3P36575 388 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 GABRA2P47869 451 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 SLC25A35Q3KQZ1 300 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 ANKRD16Q6P6B7 361 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 TMEM81Q6P7N7 255 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 TMEM200AQ86VY9 491 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 TMEM251Q8N6I4 163 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 CTHRC1Q96CG8 243 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 HES7Q9BYE0 225 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 NXF2Q9GZY0 626 aaKnown RBP9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 PLEKHJ1Q9NW61 149 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 RHBDD3Q9Y3P4 386 aa9.51□□□□□ -0.89
CARMIL3-202ENST00000559694 FFAR1O14842 300 aa9.5□□□□□ -0.89
CARMIL3-202ENST00000559694 MED6O75586 246 aa9.5□□□□□ -0.89
CARMIL3-202ENST00000559694 RRASP10301 218 aa9.5□□□□□ -0.89
CARMIL3-202ENST00000559694 SFTPCP11686 197 aa9.5□□□□□ -0.89
CARMIL3-202ENST00000559694 GABRR1P24046 479 aa9.5□□□□□ -0.89
CARMIL3-202ENST00000559694 RAB1AP62820 205 aa9.5□□□□□ -0.89
CARMIL3-202ENST00000559694 LSM11P83369 360 aaKnown RBP eCLIP9.5□□□□□ -0.89
CARMIL3-202ENST00000559694 Q499Y3 187 aa9.5□□□□□ -0.89
CARMIL3-202ENST00000559694 PRR18Q8N4B5 295 aa9.5□□□□□ -0.89
CARMIL3-202ENST00000559694 RNF141Q8WVD5 230 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms