RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 FAHD1Q6P587 224 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 LRRN1Q6UXK5 716 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 KRT77Q7Z794 578 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 TIGD4Q8IY51 512 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 ZNF454Q8N9F8 522 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 OR8S1Q8NH09 359 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 OTOSQ8NHW6 89 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 RNF133Q8WVZ7 376 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 UTP4Q969X6 686 aaKnown RBP6.9□□□□□ -1.3
SNX1-207ENST00000559401 REEP6Q96HR9 211 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 TTTY10Q9BZA0 68 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 SLC22A4Q9H015 551 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 OCEL1Q9H607 264 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 MARCH7Q9H992 704 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 METRNQ9UJH8 293 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 LAMP5Q9UJQ1 280 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 LOC105371242A0A075B767 164 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 hCG_1807616A0A1W2PRN6 198 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 CEACAM18A8MTB9 384 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 PSMD9O00233 223 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 GMDSO60547 372 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 FAM20BO75063 409 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 RGS9O75916 674 aaPredicted RBP6.89□□□□□ -1.31
SNX1-207ENST00000559401 GRPP07492 148 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 GNALP38405 381 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 OPRL1P41146 370 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 CD200P41217 278 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 HCCSP53701 268 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 ESRRGP62508 458 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 SCGB2A2Q13296 93 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 MAB21L1Q13394 359 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 MPPED2Q15777 294 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 FAM201AQ5SY85 155 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 KCTD18Q6PI47 426 aaPredicted RBP6.89□□□□□ -1.31
SNX1-207ENST00000559401 SLC16A9Q7RTY1 509 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 LRRC28Q86X40 367 aaPredicted RBP6.89□□□□□ -1.31
SNX1-207ENST00000559401 COMMD2Q86X83 199 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 PARP8Q8N3A8 854 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 TEX29Q8N6K0 151 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 TCEANCQ8N8B7 351 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 C19orf18Q8NEA5 215 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 OR52H1Q8NGJ2 320 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 PYDC1Q8WXC3 89 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 TMEM158Q8WZ71 300 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 SIGLEC11Q96RL6 698 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 REPIN1Q9BWE0 567 aaKnown RBP6.89□□□□□ -1.31
SNX1-207ENST00000559401 PAPOLGQ9BWT3 736 aaKnown RBP6.89□□□□□ -1.31
SNX1-207ENST00000559401 OR10A2Q9H208 303 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 RIBC2Q9H4K1 309 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 FN3KRPQ9HA64 309 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 PATZ1Q9HBE1 687 aaKnown RBP6.89□□□□□ -1.31
SNX1-207ENST00000559401 MRPL15Q9P015 296 aaKnown RBP6.89□□□□□ -1.31
SNX1-207ENST00000559401 H2AFY2Q9P0M6 372 aaPredicted RBP6.89□□□□□ -1.31
SNX1-207ENST00000559401 OR5V1Q9UGF6 321 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 ENOPH1Q9UHY7 261 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 GTF2A1LQ9UNN4 478 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 KLHDC2Q9Y2U9 406 aa6.89□□□□□ -1.31
SNX1-207ENST00000559401 PPIAL4EA0A075B759 164 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 PPIAL4DF5H284 164 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 TCF21O43680 179 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 PRKYO43930 277 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 PPIAL4FP0DN26 164 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 ADRA2CP18825 462 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 SLC2A5P22732 501 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 CFL1P23528 166 aaKnown RBP6.88□□□□□ -1.31
SNX1-207ENST00000559401 GATA3P23771 443 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 CD80P33681 288 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 DDOSTP39656 456 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 GATA4P43694 442 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 PSMA6P60900 246 aaKnown RBP6.88□□□□□ -1.31
SNX1-207ENST00000559401 SEC61A1P61619 476 aaKnown RBP6.88□□□□□ -1.31
SNX1-207ENST00000559401 GNB2P62879 340 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 FAM3AP98173 230 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 MZT1Q08AG7 82 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 OR8B8Q15620 311 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 LIPNQ5VXI9 398 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 SLX4IPQ5VYV7 408 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 KDM4DQ6B0I6 523 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 NLRC3Q7RTR2 1065 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 BCDIN3DQ7Z5W3 292 aaKnown RBP6.88□□□□□ -1.31
SNX1-207ENST00000559401 FTMTQ8N4E7 242 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 RFLNBQ8N5W9 214 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 CELF2-AS1Q8N7Q2 184 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 SPERTQ8NA61 448 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 DEFB108BQ8NET1 73 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 OR8B3Q8NGG8 313 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 FAM81AQ8TBF8 368 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 ERGIC1Q969X5 290 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 SGK3Q96BR1 496 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 DUS3LQ96G46 650 aaKnown RBP6.88□□□□□ -1.31
SNX1-207ENST00000559401 CENPNQ96H22 339 aaPredicted RBP6.88□□□□□ -1.31
SNX1-207ENST00000559401 OR8B2Q96RD0 313 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 IL4I1Q96RQ9 567 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 CNN2Q99439 309 aaKnown RBP6.88□□□□□ -1.31
SNX1-207ENST00000559401 TEAD3Q99594 435 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 CIB1Q99828 191 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 MRI1Q9BV20 369 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 YIPF3Q9GZM5 350 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 GABARAPL1Q9H0R8 117 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 C7orf69Q9H7B7 122 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms