RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 ZNF799Q96GE5 643 aa13.37□□□□□ -0.27
CDC42BPB-205ENST00000559245 NMNAT3Q96T66 252 aa13.37□□□□□ -0.27
CDC42BPB-205ENST00000559245 KAAG1Q9UBP8 84 aa13.37□□□□□ -0.27
CDC42BPB-205ENST00000559245 AP3M1Q9Y2T2 418 aa13.37□□□□□ -0.27
CDC42BPB-205ENST00000559245 CAB39Q9Y376 341 aaPredicted RBP13.37□□□□□ -0.27
CDC42BPB-205ENST00000559245 NOTCH3Q9UM47 2321 aa13.37□□□□□ -0.27
CDC42BPB-205ENST00000559245 IGHV3OR15-7A0A075B7D8 119 aa13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 hCG_1807616A0A1W2PRN6 198 aa13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 A6NLC8 198 aa13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 GSTA4O15217 222 aa13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 ALX3O95076 343 aa13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 LHBP01229 141 aa13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 TGFBR2P37173 567 aa13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 LIPEQ05469 1076 aa13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 RFX4Q33E94 735 aa13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 SNAI3Q3KNW1 292 aa13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 TEX36Q5VZQ5 186 aa13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 ZBTB46Q86UZ6 589 aa13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 SLC15A3Q8IY34 581 aa13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 FGFRL1Q8N441 504 aa13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 SPERTQ8NA61 448 aa13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 OR4K13Q8NH42 304 aa13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 OR2AE1Q8NHA4 323 aa13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 NPRL2Q8WTW4 380 aa13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 SPTSSAQ969W0 71 aa13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 MAP6Q96JE9 813 aa13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 RPRD1BQ9NQG5 326 aaKnown RBP13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 MRPL15Q9P015 296 aaKnown RBP13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 ONECUT1Q9UBC0 465 aa13.36□□□□□ -0.27
CDC42BPB-205ENST00000559245 TRBV4-1A0A0J9YWV2 114 aa13.35□□□□□ -0.27
CDC42BPB-205ENST00000559245 HLA-DQA2P01906 255 aa13.35□□□□□ -0.27
CDC42BPB-205ENST00000559245 HIST1H1CP16403 213 aaKnown RBP13.35□□□□□ -0.27
CDC42BPB-205ENST00000559245 ANOS1P23352 680 aa13.35□□□□□ -0.27
CDC42BPB-205ENST00000559245 SEC23BQ15437 767 aa13.35□□□□□ -0.27
CDC42BPB-205ENST00000559245 GLYATL3Q5SZD4 288 aa13.35□□□□□ -0.27
CDC42BPB-205ENST00000559245 SLC35E4Q6ICL7 350 aa13.35□□□□□ -0.27
CDC42BPB-205ENST00000559245 METAP1DQ6UB28 335 aaPredicted RBP13.35□□□□□ -0.27
CDC42BPB-205ENST00000559245 ARPINQ7Z6K5 226 aa13.35□□□□□ -0.27
CDC42BPB-205ENST00000559245 LY6G5BQ8NDX9 201 aa13.35□□□□□ -0.27
CDC42BPB-205ENST00000559245 RCN3Q96D15 328 aa13.35□□□□□ -0.27
CDC42BPB-205ENST00000559245 KRCC1Q9NPI7 259 aaPredicted RBP13.35□□□□□ -0.27
CDC42BPB-205ENST00000559245 SIRT7Q9NRC8 400 aa13.35□□□□□ -0.27
CDC42BPB-205ENST00000559245 FAM32AQ9Y421 112 aaKnown RBP13.35□□□□□ -0.27
CDC42BPB-205ENST00000559245 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 A0A1B0GW55 424 aa13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 BHLHE40O14503 412 aa13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 ARPC3O15145 178 aa13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 PRB2P02812 416 aaPredicted RBP13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 DUX4L2P0CJ85 424 aa13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 DUX4L3P0CJ86 424 aa13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 DUX4L4P0CJ87 422 aa13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 DUX4L5P0CJ88 424 aa13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 DUX4L6P0CJ89 424 aa13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 DUX4L7P0CJ90 424 aa13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 TROVE2P10155 538 aaKnown RBP eCLIP13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 EEF1B2P24534 225 aaKnown RBP13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 ELF3P78545 371 aaPredicted RBP13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 PRB3Q04118 309 aaPredicted RBP13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 MZT1Q08AG7 82 aa13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 SF3A3Q12874 501 aaKnown RBP eCLIP13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 KPRPQ5T749 579 aaPredicted RBP13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 DUX4L9Q6RFH8 374 aaPredicted RBP13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 Q6ZPA2 131 aa13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 CMTM4Q8IZR5 234 aa13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 GALNT4Q8N4A0 578 aa13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 FANK1Q8TC84 345 aa13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 FAM162AQ96A26 154 aa13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 CCL13Q99616 98 aa13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 OR52D1Q9H346 318 aa13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 FN3KQ9H479 309 aa13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 C14orf119Q9NWQ9 140 aa13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 MRPL22Q9NWU5 206 aaKnown RBP13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 NDUFAF4Q9P032 175 aa13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 DUX4Q9UBX2 424 aa13.34□□□□□ -0.27
CDC42BPB-205ENST00000559245 A0A1W2PRD5 423 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 A0A1W2PRF3 423 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 A0A1W2PRM7 423 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 OR6C68A6NDL8 312 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 ANKRD61A6NGH8 418 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 RNASEK-C17orf49H0YIS7 233 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 NME4O00746 187 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 NPFFO15130 113 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 OPN1MWP04001 364 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 OPN1MW2P0DN77 364 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 OPN1MW3P0DN78 364 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 RHCEP18577 417 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 SLC6A6P31641 620 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 GUCA2AQ02747 115 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 HERPUD1Q15011 391 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 PCK2Q16822 640 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 MICBQ29980 383 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 WDR38Q5JTN6 314 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 SAMD5Q5TGI4 173 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 Q6ZTK2 550 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 LNX2Q8N448 690 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 OR56B2PQ8NGI1 322 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 OR52J3Q8NH60 311 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 DMRTB1Q96MA1 342 aa13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 NSRP1Q9H0G5 558 aaKnown RBP13.33□□□□□ -0.28
CDC42BPB-205ENST00000559245 PPA2Q9H2U2 334 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms