RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 IGHV2-70DA0A0C4DH43 119 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 A0A1B0GWJ7 208 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 DNAJC9-AS1A6NH13 148 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 F5H5P2 479 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 H0YL77 283 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 PHYHO14832 338 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 KRT36O76013 467 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 FSTL3O95633 263 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 CYB5R3P00387 301 aaPredicted RBP6.75□□□□□ -1.33
TRAF3-205ENST00000558700 LCATP04180 440 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 CLEC2LP0C7M8 214 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 PPIAL4GP0DN37 164 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 ZNF823P16415 610 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 PITPNBP48739 271 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 MNAT1P51948 309 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 TPTEP56180 551 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 GK2Q14410 553 aaPredicted RBP6.75□□□□□ -1.33
TRAF3-205ENST00000558700 KRTAP27-1Q3LI81 207 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 ZNF404Q494X3 552 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 CLEC12AQ5QGZ9 265 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 PGBD2Q6P3X8 592 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 LRRN1Q6UXK5 716 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 DCDC5Q6ZRR9 648 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 PGAP1Q75T13 922 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 KLBQ86Z14 1044 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 DEFB107AQ8IZN7 70 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 SIGLECL1Q8N7X8 197 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 ZDHHC22Q8N966 263 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 ZBTB34Q8NCN2 500 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 OR52E2Q8NGJ4 325 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 OR2T4Q8NH00 348 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 ZNF420Q8TAQ5 688 aaPredicted RBP6.75□□□□□ -1.33
TRAF3-205ENST00000558700 SPRYD4Q8WW59 207 aaPredicted RBP6.75□□□□□ -1.33
TRAF3-205ENST00000558700 SPTSSAQ969W0 71 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 ERGIC1Q969X5 290 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 CDRT15Q96T59 188 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 ADAT1Q9BUB4 502 aaKnown RBP6.75□□□□□ -1.33
TRAF3-205ENST00000558700 PLA2G12AQ9BZM1 189 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 SLC22A4Q9H015 551 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 MUC13Q9H3R2 512 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 OPA3Q9H6K4 179 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 WDR76Q9H967 626 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 TBC1D23Q9NUY8 699 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 CD300AQ9UGN4 299 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 CYB5R1Q9UHQ9 305 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 ARL2BPQ9Y2Y0 163 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 PPIAL4AQ9Y536 164 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 LYVE1Q9Y5Y7 322 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 NBEAL1Q6ZS30 2694 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 SVEP1Q4LDE5 3571 aa6.75□□□□□ -1.33
TRAF3-205ENST00000558700 TENM1Q9UKZ4 2725 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 IGHV3-64DA0A0J9YX35 117 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 OR6C68A6NDL8 312 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 TRAPPC2LH3BP13 241 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 TNFRSF11BO00300 401 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 BHLHE40O14503 412 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 APOL3O95236 402 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 WNT2P09544 360 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 MSX2P35548 267 aaPredicted RBP6.74□□□□□ -1.33
TRAF3-205ENST00000558700 GGT2P36268 569 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 CD200P41217 278 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 MTNR1AP48039 350 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 GNGT1P63211 74 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 FOXL1Q12952 345 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 KCNJ8Q15842 424 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 AWAT1Q58HT5 328 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 RASSF6Q6ZTQ3 369 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 PARP8Q8N3A8 854 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 CYB561A3Q8NBI2 242 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 OR9Q2Q8NGE9 314 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 SGMS2Q8NHU3 365 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 Q8TCH9 128 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 TMEM246Q9BRR3 403 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 BTBD10Q9BSF8 475 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 COPS4Q9BT78 406 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 TRIM15Q9C019 465 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 MS4A7Q9GZW8 240 aaPredicted RBP6.74□□□□□ -1.33
TRAF3-205ENST00000558700 EGLN3Q9H6Z9 239 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 FN3KRPQ9HA64 309 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 PNRC2Q9NPJ4 139 aaKnown RBP6.74□□□□□ -1.33
TRAF3-205ENST00000558700 MRPL22Q9NWU5 206 aaKnown RBP6.74□□□□□ -1.33
TRAF3-205ENST00000558700 ACTR3BQ9P1U1 418 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 CLN8Q9UBY8 286 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 ZNF69Q9UC07 566 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 BAIAP2Q9UQB8 552 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 COMMD3-BMI1R4GMX3 469 aa6.74□□□□□ -1.33
TRAF3-205ENST00000558700 DOCK11Q5JSL3 2073 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 GGT3PA6NGU5 568 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 RIIAD1A6NNX1 92 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 CD300LBA8K4G0 201 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 ZNF878C9JN71 531 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 XRCC2O43543 280 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 ENSAO43768 121 aaKnown RBP6.73□□□□□ -1.33
TRAF3-205ENST00000558700 FAM20BO75063 409 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 CCNB2O95067 398 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 IFNGP01579 166 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 HLA-DPB1P04440 258 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 SPARCP09486 303 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 HKR1P10072 659 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 ZNF3P17036 446 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms