RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 GSX2Q9BZM3 304 aa14.89□□□□□ -0.03
TPM1-214ENST00000558544 MS4A5Q9H3V2 200 aa14.89□□□□□ -0.03
TPM1-214ENST00000558544 OPA3Q9H6K4 179 aa14.89□□□□□ -0.03
TPM1-214ENST00000558544 ISG20L2Q9H9L3 353 aaKnown RBP14.89□□□□□ -0.03
TPM1-214ENST00000558544 MSL2Q9HCI7 577 aa14.89□□□□□ -0.03
TPM1-214ENST00000558544 NUFIP1Q9UHK0 495 aaKnown RBP14.89□□□□□ -0.03
TPM1-214ENST00000558544 OR52A1Q9UKL2 312 aa14.89□□□□□ -0.03
TPM1-214ENST00000558544 ITGB1BP2Q9UKP3 347 aa14.89□□□□□ -0.03
TPM1-214ENST00000558544 EXOSC1Q9Y3B2 195 aaKnown RBP14.89□□□□□ -0.03
TPM1-214ENST00000558544 SNX5Q9Y5X3 404 aa14.89□□□□□ -0.03
TPM1-214ENST00000558544 PRRC2AP48634 2157 aaKnown RBP14.89□□□□□ -0.03
TPM1-214ENST00000558544 GGT3PA6NGU5 568 aa14.88□□□□□ -0.03
TPM1-214ENST00000558544 ZSCAN5BA6NJL1 495 aa14.88□□□□□ -0.03
TPM1-214ENST00000558544 IQCF6A8MYZ5 107 aa14.88□□□□□ -0.03
TPM1-214ENST00000558544 LILRA1O75019 489 aa14.88□□□□□ -0.03
TPM1-214ENST00000558544 IGHV4-39P01824 125 aa14.88□□□□□ -0.03
TPM1-214ENST00000558544 MT-ND5P03915 603 aa14.88□□□□□ -0.03
TPM1-214ENST00000558544 RPSAP08865 295 aaKnown RBP14.88□□□□□ -0.03
TPM1-214ENST00000558544 TACSTD2P09758 323 aa14.88□□□□□ -0.03
TPM1-214ENST00000558544 SELEP16581 610 aa14.88□□□□□ -0.03
TPM1-214ENST00000558544 MYL12AP19105 171 aa14.88□□□□□ -0.03
TPM1-214ENST00000558544 ZNF81P51508 661 aa14.88□□□□□ -0.03
TPM1-214ENST00000558544 CSNK2BP67870 215 aa14.88□□□□□ -0.03
TPM1-214ENST00000558544 KCTD20Q7Z5Y7 419 aa14.88□□□□□ -0.03
TPM1-214ENST00000558544 CATSPERDQ86XM0 798 aa14.88□□□□□ -0.03
TPM1-214ENST00000558544 SYS1Q8N2H4 156 aa14.88□□□□□ -0.03
TPM1-214ENST00000558544 STX19Q8N4C7 294 aa14.88□□□□□ -0.03
TPM1-214ENST00000558544 LYZL4Q96KX0 146 aa14.88□□□□□ -0.03
TPM1-214ENST00000558544 MYCBPQ99417 103 aaPredicted RBP14.88□□□□□ -0.03
TPM1-214ENST00000558544 FKBP14Q9NWM8 211 aa14.88□□□□□ -0.03
TPM1-214ENST00000558544 SCN3BQ9NY72 215 aa14.88□□□□□ -0.03
TPM1-214ENST00000558544 CGGBP1Q9UFW8 167 aaPredicted RBP14.88□□□□□ -0.03
TPM1-214ENST00000558544 CLEC2DQ9UHP7 191 aa14.88□□□□□ -0.03
TPM1-214ENST00000558544 SLC22A13Q9Y226 551 aa14.88□□□□□ -0.03
TPM1-214ENST00000558544 TANC2Q9HCD6 1990 aa14.88□□□□□ -0.03
TPM1-214ENST00000558544 MAP1AP78559 2803 aaPredicted RBP14.88□□□□□ -0.03
TPM1-214ENST00000558544 MYO9AB2RTY4 2548 aa14.88□□□□□ -0.03
TPM1-214ENST00000558544 hCG_38984A0A1B0GV85 526 aa14.87□□□□□ -0.03
TPM1-214ENST00000558544 CD300LBA8K4G0 201 aa14.87□□□□□ -0.03
TPM1-214ENST00000558544 C17orf100A8MU93 164 aa14.87□□□□□ -0.03
TPM1-214ENST00000558544 PTGES3LE9PB15 166 aa14.87□□□□□ -0.03
TPM1-214ENST00000558544 TTRP02766 147 aa14.87□□□□□ -0.03
TPM1-214ENST00000558544 ART1P52961 327 aa14.87□□□□□ -0.03
TPM1-214ENST00000558544 FAM3AP98173 230 aa14.87□□□□□ -0.03
TPM1-214ENST00000558544 Q6ZR03 302 aa14.87□□□□□ -0.03
TPM1-214ENST00000558544 COMMD2Q86X83 199 aa14.87□□□□□ -0.03
TPM1-214ENST00000558544 LRRC75A-AS1Q8N1F1 130 aa14.87□□□□□ -0.03
TPM1-214ENST00000558544 ZNF786Q8N393 782 aa14.87□□□□□ -0.03
TPM1-214ENST00000558544 PRSS35Q8N3Z0 413 aa14.87□□□□□ -0.03
TPM1-214ENST00000558544 OR56B2PQ8NGI1 322 aa14.87□□□□□ -0.03
TPM1-214ENST00000558544 OR51E1Q8TCB6 317 aa14.87□□□□□ -0.03
TPM1-214ENST00000558544 SPRYD4Q8WW59 207 aaPredicted RBP14.87□□□□□ -0.03
TPM1-214ENST00000558544 SGCDQ92629 289 aa14.87□□□□□ -0.03
TPM1-214ENST00000558544 RNF166Q96A37 237 aaPredicted RBP14.87□□□□□ -0.03
TPM1-214ENST00000558544 PELI1Q96FA3 418 aa14.87□□□□□ -0.03
TPM1-214ENST00000558544 SOX7Q9BT81 388 aa14.87□□□□□ -0.03
TPM1-214ENST00000558544 RAB1BQ9H0U4 201 aa14.87□□□□□ -0.03
TPM1-214ENST00000558544 RGCCQ9H4X1 137 aa14.87□□□□□ -0.03
TPM1-214ENST00000558544 CYSLTR2Q9NS75 346 aa14.87□□□□□ -0.03
TPM1-214ENST00000558544 A0A0U1RQV5 110 aa14.86□□□□□ -0.03
TPM1-214ENST00000558544 SPRY3O43610 288 aa14.86□□□□□ -0.03
TPM1-214ENST00000558544 LY6HO94772 140 aa14.86□□□□□ -0.03
TPM1-214ENST00000558544 HTR1AP08908 422 aa14.86□□□□□ -0.03
TPM1-214ENST00000558544 CCDC159P0C7I6 412 aa14.86□□□□□ -0.03
TPM1-214ENST00000558544 CFL1P23528 166 aaKnown RBP14.86□□□□□ -0.03
TPM1-214ENST00000558544 C21orf33P30042 268 aaPredicted RBP14.86□□□□□ -0.03
TPM1-214ENST00000558544 LIPAP38571 399 aa14.86□□□□□ -0.03
TPM1-214ENST00000558544 MAGEB1P43366 347 aa14.86□□□□□ -0.03
TPM1-214ENST00000558544 ODF4Q2M2E3 257 aa14.86□□□□□ -0.03
TPM1-214ENST00000558544 ZMAT1Q5H9K5 638 aa14.86□□□□□ -0.03
TPM1-214ENST00000558544 WDR38Q5JTN6 314 aa14.86□□□□□ -0.03
TPM1-214ENST00000558544 OR2G6Q5TZ20 316 aa14.86□□□□□ -0.03
TPM1-214ENST00000558544 ELMOD2Q8IZ81 293 aa14.86□□□□□ -0.03
TPM1-214ENST00000558544 KLHL36Q8N4N3 616 aa14.86□□□□□ -0.03
TPM1-214ENST00000558544 OR8G5Q8NG78 346 aa14.86□□□□□ -0.03
TPM1-214ENST00000558544 NR1H4Q96RI1 486 aaPredicted RBP14.86□□□□□ -0.03
TPM1-214ENST00000558544 FOXC2Q99958 501 aa14.86□□□□□ -0.03
TPM1-214ENST00000558544 GPR84Q9NQS5 396 aa14.86□□□□□ -0.03
TPM1-214ENST00000558544 PAK1IP1Q9NWT1 392 aaPredicted RBP14.86□□□□□ -0.03
TPM1-214ENST00000558544 CHCHD3Q9NX63 227 aaKnown RBP14.86□□□□□ -0.03
TPM1-214ENST00000558544 CAB39Q9Y376 341 aaPredicted RBP14.86□□□□□ -0.03
TPM1-214ENST00000558544 TPRKBQ9Y3C4 175 aa14.86□□□□□ -0.03
TPM1-214ENST00000558544 P2RY10O00398 339 aa14.85□□□□□ -0.03
TPM1-214ENST00000558544 IGLV3-1P01715 115 aa14.85□□□□□ -0.03
TPM1-214ENST00000558544 IGHV1-46P01743 117 aa14.85□□□□□ -0.03
TPM1-214ENST00000558544 CDK1P06493 297 aa14.85□□□□□ -0.03
TPM1-214ENST00000558544 ERCC1P07992 297 aaPredicted RBP14.85□□□□□ -0.03
TPM1-214ENST00000558544 KIR3DL2P43630 455 aa14.85□□□□□ -0.03
TPM1-214ENST00000558544 GSK3AP49840 483 aa14.85□□□□□ -0.03
TPM1-214ENST00000558544 NANOS3P60323 173 aaKnown RBP14.85□□□□□ -0.03
TPM1-214ENST00000558544 SLC35A2P78381 396 aa14.85□□□□□ -0.03
TPM1-214ENST00000558544 TNK1Q13470 666 aa14.85□□□□□ -0.03
TPM1-214ENST00000558544 TSTQ16762 297 aaKnown RBP14.85□□□□□ -0.03
TPM1-214ENST00000558544 OR2G2Q8NGZ5 317 aa14.85□□□□□ -0.03
TPM1-214ENST00000558544 FAM71F1Q96KD3 344 aaPredicted RBP14.85□□□□□ -0.03
TPM1-214ENST00000558544 ZNF391Q9UJN7 358 aa14.85□□□□□ -0.03
TPM1-214ENST00000558544 OTOGQ6ZRI0 2925 aa14.85□□□□□ -0.03
TPM1-214ENST00000558544 E9PI62 339 aa14.85□□□□□ -0.03
TPM1-214ENST00000558544 NCR1O76036 304 aa14.85□□□□□ -0.03
TPM1-214ENST00000558544 CRHBPP24387 322 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms