RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 WIF1Q9Y5W5 379 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 MRPS18BQ9Y676 258 aaKnown RBP2.86□□□□□ -1.95
TDP1-217ENST00000557782 THSD7BQ9C0I4 1608 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 HCFC1P51610 2035 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 IGLV1-36A0A0B4J1U3 117 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 TRAV8-4A0A0B4J246 113 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 SLC5A10A0PJK1 596 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 CIB4A0PJX0 185 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 PRR23AA6NEV1 266 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 GOLGA6L19H0YKK7 550 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 H7C417 338 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 TNFRSF11BO00300 401 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 CDIPTO14735 213 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 UBDO15205 165 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 KMOO15229 486 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 PHF1O43189 567 aaPredicted RBP2.85□□□□□ -1.95
TDP1-217ENST00000557782 ZW10O43264 779 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 SHOX2O60902 331 aaPredicted RBP2.85□□□□□ -1.95
TDP1-217ENST00000557782 PSMG1O95456 288 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 RAB36O95755 333 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 CD8AP01732 235 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 P01737 135 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 ORM1P02763 201 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 GIPP09681 153 aaPredicted RBP2.85□□□□□ -1.95
TDP1-217ENST00000557782 CHTF8P0CG12 524 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 HSPD1P10809 573 aaKnown RBP2.85□□□□□ -1.95
TDP1-217ENST00000557782 PVALBP20472 110 aaPredicted RBP2.85□□□□□ -1.95
TDP1-217ENST00000557782 HLA-DMAP28067 261 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 MYCNOSP40205 109 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 TUFMP49411 452 aaKnown RBP2.85□□□□□ -1.95
TDP1-217ENST00000557782 P2RX1P51575 399 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 RPS23P62266 143 aaKnown RBP2.85□□□□□ -1.95
TDP1-217ENST00000557782 PRR3P79522 188 aaKnown RBP2.85□□□□□ -1.95
TDP1-217ENST00000557782 MADCAM1Q13477 382 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 PON3Q15166 354 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 OR1Q1Q15612 314 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 BCL2A1Q16548 175 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 RFX4Q33E94 735 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 SLC36A2Q495M3 483 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 TIMM23BQ5SRD1 257 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 CASC10Q5T4H9 136 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 SYT6Q5T7P8 510 aaPredicted RBP2.85□□□□□ -1.95
TDP1-217ENST00000557782 CGB2Q6NT52 195 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 NIPAL1Q6NVV3 410 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 EPGNQ6UW88 154 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 PAMR1Q6UXH9 720 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 C18orf65Q6ZTR6 163 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 FAM19A1Q7Z5A9 133 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 TMEM179BQ7Z7N9 219 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 Q8N9P0 234 aaPredicted RBP2.85□□□□□ -1.95
TDP1-217ENST00000557782 OR4K17Q8NGC6 315 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 OR51Q1Q8NH59 317 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 DYNC2LI1Q8TCX1 351 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 GTSF1Q8WW33 167 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 FAM151AQ8WW52 585 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 OR5P2Q8WZ92 322 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 CREB3L1Q96BA8 519 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 S100PBPQ96BU1 408 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 FLYWCH2Q96CP2 140 aaKnown RBP2.85□□□□□ -1.95
TDP1-217ENST00000557782 RDH12Q96NR8 316 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 HBEGFQ99075 208 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 TEAD3Q99594 435 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 C20orf144Q9BQM9 153 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 SULT4A1Q9BR01 284 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 PAXXQ9BUH6 204 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 CLMPQ9H6B4 373 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 ZNF702PQ9H963 129 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 MED4Q9NPJ6 270 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 FAM49BQ9NUQ9 324 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 MTFP1Q9UDX5 166 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 FBXL3Q9UKT7 428 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 ZNF257Q9Y2Q1 563 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 PRG3Q9Y2Y8 225 aaPredicted RBP2.85□□□□□ -1.95
TDP1-217ENST00000557782 KIAA0232Q92628 1395 aa2.85□□□□□ -1.95
TDP1-217ENST00000557782 PLB1Q6P1J6 1458 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 NISCHQ9Y2I1 1504 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 TMEM131Q92545 1883 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 A0A0G2JN53 185 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 A0A0J9YXY3 114 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 KIR2DS1A0A191URI9 304 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 PEX7O00628 323 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 SLC31A1O15431 190 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 FAM189A1O60320 539 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 FABP3P05413 133 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 RCC1P18754 421 aaPredicted RBP2.84□□□□□ -1.95
TDP1-217ENST00000557782 RAB3AP20336 220 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 PSMB1P20618 241 aaKnown RBP2.84□□□□□ -1.95
TDP1-217ENST00000557782 CEACAM6P40199 344 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 ACTR1BP42025 376 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 CEBPGP53567 150 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 DIO3P55073 304 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 BNIP2Q12982 314 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 CAPRIN1Q14444 709 aaKnown RBP2.84□□□□□ -1.95
TDP1-217ENST00000557782 KIR2DS1Q14954 304 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 GOLGA7BQ2TAP0 167 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 TFDP3Q5H9I0 405 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 OR10J3Q5JRS4 329 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 CEP85LQ5SZL2 805 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 LCE4AQ5TA78 99 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 ZC2HC1BQ5TFG8 222 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms