RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 SLC2A1P11166 492 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 PSKH1P11801 424 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 SPI1P17947 270 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 SLC15A1P46059 708 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 NPY4RP50391 375 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 GYS2P54840 703 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 IL13RA1P78552 427 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 GPR157Q5UAW9 335 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 SFRP4Q6FHJ7 346 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-235ENST00000557740 SPATC1Q76KD6 591 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 FITM2Q8N6M3 262 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 ZNF511Q8NB15 262 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 PLPP7Q8NBV4 271 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 ZNRF4Q8WWF5 429 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 KCNJ15Q99712 375 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 MUC13Q9H3R2 512 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 MAGIXQ9H6Y5 334 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 REEP1Q9H902 201 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 ARMC1Q9NVT9 282 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 C14orf119Q9NWQ9 140 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 C1orf123Q9NWV4 160 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 ERVK-18Q9QC07 812 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 SAMHD1Q9Y3Z3 626 aaKnown RBP12.19□□□□□ -0.46
SHMT2-235ENST00000557740 hCG_1807616A0A1W2PRN6 198 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 C5orf63A6NC05 138 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 ZNF593O00488 134 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-235ENST00000557740 TMPRSS2O15393 492 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 TBX1O43435 398 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 ADAM20O43506 726 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 PTBP3O95758 552 aaKnown RBP12.18□□□□□ -0.46
SHMT2-235ENST00000557740 ZNF3P17036 446 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 ANOS1P23352 680 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 PSMB10P40306 273 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 BLVRAP53004 296 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 SLC25A1P53007 311 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 GRB2P62993 217 aaKnown RBP12.18□□□□□ -0.46
SHMT2-235ENST00000557740 HOXA4Q00056 320 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-235ENST00000557740 PPP1R8Q12972 351 aaKnown RBP12.18□□□□□ -0.46
SHMT2-235ENST00000557740 PCK2Q16822 640 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 FAM98BQ52LJ0 330 aaKnown RBP12.18□□□□□ -0.46
SHMT2-235ENST00000557740 ZNF362Q5T0B9 420 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-235ENST00000557740 CD276Q5ZPR3 534 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 OR2T5Q6IEZ7 315 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 BRD3OSQ6XYD6 125 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 ZNF841Q6ZN19 808 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 PIGWQ7Z7B1 504 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 DHFR2Q86XF0 187 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 ARHGAP24Q8N264 748 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 OR2T29Q8NH02 315 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 OR4Q3Q8NH05 313 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 OR8S1Q8NH09 359 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 ZDHHC16Q969W1 377 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 PCGF1Q9BSM1 259 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 DGCR6LQ9BY27 220 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 NMNAT2Q9BZQ4 307 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 UNKLQ9H9P5 680 aaKnown RBP12.18□□□□□ -0.46
SHMT2-235ENST00000557740 SOX21Q9Y651 276 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-235ENST00000557740 U3KQV3 271 aa12.18□□□□□ -0.46
SHMT2-235ENST00000557740 TRAV38-1A0A0B4J264 116 aa12.17□□□□□ -0.46
SHMT2-235ENST00000557740 MDFIC2A0A1B0GVS7 189 aa12.17□□□□□ -0.46
SHMT2-235ENST00000557740 TCRBV5S2A0A599 114 aa12.17□□□□□ -0.46
SHMT2-235ENST00000557740 DHRS12A0PJE2 317 aa12.17□□□□□ -0.46
SHMT2-235ENST00000557740 OOEPA6NGQ2 149 aa12.17□□□□□ -0.46
SHMT2-235ENST00000557740 ANKRD30BLA7E2S9 258 aa12.17□□□□□ -0.46
SHMT2-235ENST00000557740 B2RBV5 119 aa12.17□□□□□ -0.46
SHMT2-235ENST00000557740 NDUFA2O43678 99 aa12.17□□□□□ -0.46
SHMT2-235ENST00000557740 ANXA2P07355 339 aaKnown RBP12.17□□□□□ -0.46
SHMT2-235ENST00000557740 GRPP07492 148 aa12.17□□□□□ -0.46
SHMT2-235ENST00000557740 HSD11B1P28845 292 aa12.17□□□□□ -0.46
SHMT2-235ENST00000557740 CX3CR1P49238 355 aa12.17□□□□□ -0.46
SHMT2-235ENST00000557740 EIF2B1Q14232 305 aaKnown RBP12.17□□□□□ -0.46
SHMT2-235ENST00000557740 TIGD6Q17RP2 521 aa12.17□□□□□ -0.46
SHMT2-235ENST00000557740 MICAQ29983 383 aa12.17□□□□□ -0.46
SHMT2-235ENST00000557740 TEX30Q5JUR7 227 aa12.17□□□□□ -0.46
SHMT2-235ENST00000557740 LCN8Q6JVE9 175 aa12.17□□□□□ -0.46
SHMT2-235ENST00000557740 OR6N2Q8NGY6 317 aa12.17□□□□□ -0.46
SHMT2-235ENST00000557740 TEX47Q8TBZ9 253 aa12.17□□□□□ -0.46
SHMT2-235ENST00000557740 SP140LQ9H930 580 aa12.17□□□□□ -0.46
SHMT2-235ENST00000557740 VNN3Q9NY84 501 aa12.17□□□□□ -0.46
SHMT2-235ENST00000557740 CTSZQ9UBR2 303 aa12.17□□□□□ -0.46
SHMT2-235ENST00000557740 ZNF879B4DU55 563 aa12.16□□□□□ -0.46
SHMT2-235ENST00000557740 LIPFP07098 398 aa12.16□□□□□ -0.46
SHMT2-235ENST00000557740 CLUP10909 449 aa12.16□□□□□ -0.46
SHMT2-235ENST00000557740 GRK5P34947 590 aa12.16□□□□□ -0.46
SHMT2-235ENST00000557740 CFHR2P36980 270 aa12.16□□□□□ -0.46
SHMT2-235ENST00000557740 DDOSTP39656 456 aa12.16□□□□□ -0.46
SHMT2-235ENST00000557740 BPIFB3P59826 476 aa12.16□□□□□ -0.46
SHMT2-235ENST00000557740 DEFB112Q30KQ8 113 aa12.16□□□□□ -0.46
SHMT2-235ENST00000557740 PRR31Q5SQ13 230 aa12.16□□□□□ -0.46
SHMT2-235ENST00000557740 C16orf87Q6PH81 154 aa12.16□□□□□ -0.46
SHMT2-235ENST00000557740 ZNF826PQ6ZT77 177 aa12.16□□□□□ -0.46
SHMT2-235ENST00000557740 ERI1Q8IV48 349 aaKnown RBP12.16□□□□□ -0.46
SHMT2-235ENST00000557740 PNLDC1Q8NA58 520 aaKnown RBP12.16□□□□□ -0.46
SHMT2-235ENST00000557740 OR10G2Q8NGC3 310 aa12.16□□□□□ -0.46
SHMT2-235ENST00000557740 SPSB4Q96A44 273 aa12.16□□□□□ -0.46
SHMT2-235ENST00000557740 OTULINQ96BN8 352 aa12.16□□□□□ -0.46
SHMT2-235ENST00000557740 INTS14Q96SY0 518 aa12.16□□□□□ -0.46
SHMT2-235ENST00000557740 TOR3AQ9H497 397 aa12.16□□□□□ -0.46
SHMT2-235ENST00000557740 MARCH7Q9H992 704 aa12.16□□□□□ -0.46
SHMT2-235ENST00000557740 CMC2Q9NRP2 79 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms