RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 FAM90A1Q86YD7 464 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 PNKDQ8N490 385 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 GCSAMQ8N6F7 178 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 TBC1D15Q8TC07 691 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 ZNRF4Q8WWF5 429 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 DYRK2Q92630 601 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 ZNF799Q96GE5 643 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 NSRP1Q9H0G5 558 aaKnown RBP11.62□□□□□ -0.55
SLIRP-210ENST00000557431 OR52D1Q9H346 318 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 ANKRD19PQ9H560 264 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 PPP1R3EQ9H7J1 279 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 SIRT7Q9NRC8 400 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 NDUFAF4Q9P032 175 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 POMT1Q9Y6A1 747 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 OR6C68A6NDL8 312 aa11.61□□□□□ -0.55
SLIRP-210ENST00000557431 GGT3PA6NGU5 568 aa11.61□□□□□ -0.55
SLIRP-210ENST00000557431 CLPXO76031 633 aa11.61□□□□□ -0.55
SLIRP-210ENST00000557431 RENP00797 406 aa11.61□□□□□ -0.55
SLIRP-210ENST00000557431 TFF1P04155 84 aa11.61□□□□□ -0.55
SLIRP-210ENST00000557431 COX4I1P13073 169 aa11.61□□□□□ -0.55
SLIRP-210ENST00000557431 NPY4RP50391 375 aa11.61□□□□□ -0.55
SLIRP-210ENST00000557431 RFX4Q33E94 735 aa11.61□□□□□ -0.55
SLIRP-210ENST00000557431 SLC35F1Q5T1Q4 408 aa11.61□□□□□ -0.55
SLIRP-210ENST00000557431 CD276Q5ZPR3 534 aa11.61□□□□□ -0.55
SLIRP-210ENST00000557431 CELF2-AS1Q8N7Q2 184 aa11.61□□□□□ -0.55
SLIRP-210ENST00000557431 OR56B2PQ8NGI1 322 aa11.61□□□□□ -0.55
SLIRP-210ENST00000557431 OR2AJ1Q8NGZ0 328 aa11.61□□□□□ -0.55
SLIRP-210ENST00000557431 ERGIC1Q969X5 290 aa11.61□□□□□ -0.55
SLIRP-210ENST00000557431 ELAC2Q9BQ52 826 aaKnown RBP11.61□□□□□ -0.55
SLIRP-210ENST00000557431 IFT27Q9BW83 186 aa11.61□□□□□ -0.55
SLIRP-210ENST00000557431 TRIM15Q9C019 465 aa11.61□□□□□ -0.55
SLIRP-210ENST00000557431 KIF17Q9P2E2 1029 aa11.61□□□□□ -0.55
SLIRP-210ENST00000557431 ONECUT1Q9UBC0 465 aa11.61□□□□□ -0.55
SLIRP-210ENST00000557431 CYB5R1Q9UHQ9 305 aa11.61□□□□□ -0.55
SLIRP-210ENST00000557431 A0A1W2PRQ8 180 aa11.6□□□□□ -0.55
SLIRP-210ENST00000557431 DYNC1I1O14576 645 aa11.6□□□□□ -0.55
SLIRP-210ENST00000557431 CCDC22O60826 627 aa11.6□□□□□ -0.55
SLIRP-210ENST00000557431 SELLP14151 372 aa11.6□□□□□ -0.55
SLIRP-210ENST00000557431 PRKXP51817 358 aa11.6□□□□□ -0.55
SLIRP-210ENST00000557431 TPTEP56180 551 aa11.6□□□□□ -0.55
SLIRP-210ENST00000557431 BPIFB3P59826 476 aa11.6□□□□□ -0.55
SLIRP-210ENST00000557431 GMFBP60983 142 aa11.6□□□□□ -0.55
SLIRP-210ENST00000557431 DGCR6Q14129 220 aa11.6□□□□□ -0.55
SLIRP-210ENST00000557431 PDCD1Q15116 288 aa11.6□□□□□ -0.55
SLIRP-210ENST00000557431 PGM2L1Q6PCE3 622 aa11.6□□□□□ -0.55
SLIRP-210ENST00000557431 WDR86Q86TI4 376 aa11.6□□□□□ -0.55
SLIRP-210ENST00000557431 LDLRAD3Q86YD5 345 aa11.6□□□□□ -0.55
SLIRP-210ENST00000557431 FAM216BQ8N7L0 139 aa11.6□□□□□ -0.55
SLIRP-210ENST00000557431 PNLDC1Q8NA58 520 aaKnown RBP11.6□□□□□ -0.55
SLIRP-210ENST00000557431 CYB561A3Q8NBI2 242 aa11.6□□□□□ -0.55
SLIRP-210ENST00000557431 OR51L1Q8NGJ5 315 aa11.6□□□□□ -0.55
SLIRP-210ENST00000557431 RP9Q8TA86 221 aaKnown RBP11.6□□□□□ -0.55
SLIRP-210ENST00000557431 C7orf34Q96L11 122 aa11.6□□□□□ -0.55
SLIRP-210ENST00000557431 CCL13Q99616 98 aa11.6□□□□□ -0.55
SLIRP-210ENST00000557431 KCTD14Q9BQ13 255 aaPredicted RBP11.6□□□□□ -0.55
SLIRP-210ENST00000557431 FUZQ9BT04 418 aa11.6□□□□□ -0.55
SLIRP-210ENST00000557431 FAM32AQ9Y421 112 aaKnown RBP11.6□□□□□ -0.55
SLIRP-210ENST00000557431 TRAV38-1A0A0B4J264 116 aa11.59□□□□□ -0.55
SLIRP-210ENST00000557431 G3V4G9 280 aa11.59□□□□□ -0.55
SLIRP-210ENST00000557431 RHCEP18577 417 aa11.59□□□□□ -0.55
SLIRP-210ENST00000557431 SLC6A6P31641 620 aa11.59□□□□□ -0.55
SLIRP-210ENST00000557431 GYS2P54840 703 aa11.59□□□□□ -0.55
SLIRP-210ENST00000557431 CSNK2BP67870 215 aa11.59□□□□□ -0.55
SLIRP-210ENST00000557431 SPIBQ01892 262 aa11.59□□□□□ -0.55
SLIRP-210ENST00000557431 EGR3Q06889 387 aa11.59□□□□□ -0.55
SLIRP-210ENST00000557431 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.59□□□□□ -0.55
SLIRP-210ENST00000557431 PCK2Q16822 640 aa11.59□□□□□ -0.55
SLIRP-210ENST00000557431 C8orf82Q6P1X6 216 aaPredicted RBP11.59□□□□□ -0.55
SLIRP-210ENST00000557431 ARPINQ7Z6K5 226 aa11.59□□□□□ -0.55
SLIRP-210ENST00000557431 ZBTB46Q86UZ6 589 aa11.59□□□□□ -0.55
SLIRP-210ENST00000557431 RNF148Q8N7C7 305 aa11.59□□□□□ -0.55
SLIRP-210ENST00000557431 C11orf44Q8N8P7 122 aa11.59□□□□□ -0.55
SLIRP-210ENST00000557431 RPUSD1Q9UJJ7 312 aaKnown RBP11.59□□□□□ -0.55
SLIRP-210ENST00000557431 SIGLEC9Q9Y336 463 aa11.59□□□□□ -0.55
SLIRP-210ENST00000557431 DSCAML1Q8TD84 2053 aa11.58□□□□□ -0.56
SLIRP-210ENST00000557431 SNX3O60493 162 aa11.58□□□□□ -0.56
SLIRP-210ENST00000557431 PTBP3O95758 552 aaKnown RBP11.58□□□□□ -0.56
SLIRP-210ENST00000557431 LIPFP07098 398 aa11.58□□□□□ -0.56
SLIRP-210ENST00000557431 PAX6P26367 422 aa11.58□□□□□ -0.56
SLIRP-210ENST00000557431 NOS3P29474 1203 aa11.58□□□□□ -0.56
SLIRP-210ENST00000557431 NUDT2P50583 147 aa11.58□□□□□ -0.56
SLIRP-210ENST00000557431 KCNJ8Q15842 424 aa11.58□□□□□ -0.56
SLIRP-210ENST00000557431 SLC36A3Q495N2 470 aa11.58□□□□□ -0.56
SLIRP-210ENST00000557431 WDR38Q5JTN6 314 aa11.58□□□□□ -0.56
SLIRP-210ENST00000557431 DHRS7BQ6IAN0 325 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-210ENST00000557431 GLYATQ6IB77 296 aa11.58□□□□□ -0.56
SLIRP-210ENST00000557431 CPLX4Q7Z7G2 160 aa11.58□□□□□ -0.56
SLIRP-210ENST00000557431 C11orf53Q8IXP5 236 aa11.58□□□□□ -0.56
SLIRP-210ENST00000557431 ZSCAN4Q8NAM6 433 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-210ENST00000557431 OR5T2Q8NGG2 359 aa11.58□□□□□ -0.56
SLIRP-210ENST00000557431 OR9Q1Q8NGQ5 310 aa11.58□□□□□ -0.56
SLIRP-210ENST00000557431 LRRC29Q8WV35 223 aa11.58□□□□□ -0.56
SLIRP-210ENST00000557431 DHRS1Q96LJ7 313 aa11.58□□□□□ -0.56
SLIRP-210ENST00000557431 FAM107BQ9H098 131 aa11.58□□□□□ -0.56
SLIRP-210ENST00000557431 EGLN3Q9H6Z9 239 aa11.58□□□□□ -0.56
SLIRP-210ENST00000557431 ZNRD1Q9P1U0 126 aa11.58□□□□□ -0.56
SLIRP-210ENST00000557431 ZNF816-ZNF321PA0A0X1KG74 233 aa11.57□□□□□ -0.56
SLIRP-210ENST00000557431 RNASEK-C17orf49H0YIS7 233 aa11.57□□□□□ -0.56
SLIRP-210ENST00000557431 BHLHE40O14503 412 aa11.57□□□□□ -0.56
SLIRP-210ENST00000557431 ACOT8O14734 319 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms