RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 SCP2D1Q9UJQ7 156 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 MRTO4Q9UKD2 239 aaKnown RBP4.23□□□□□ -1.73
ATXN3-247ENST00000557311 SLC13A4Q9UKG4 626 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 EML6Q6ZMW3 1958 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 NCKAP5O14513 1909 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 MED12Q93074 2177 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 A6NIZ1 184 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 OR5H1A6NKK0 313 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 ZNF716A6NP11 495 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 F5H0A9 414 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-247ENST00000557311 M0R3G1 203 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 DNASE2O00115 360 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-247ENST00000557311 UBE2CO00762 179 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 TNFSF11O14788 317 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 DLEU1O43261 78 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 TRIAP1O43715 76 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 OR10H3O60404 316 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 EDF1O60869 148 aaKnown RBP4.22□□□□□ -1.73
ATXN3-247ENST00000557311 NME6O75414 186 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-247ENST00000557311 LYPLA1O75608 230 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-247ENST00000557311 LYZL6O75951 148 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 LY6HO94772 140 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 CLDN9O95484 217 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 CHRNGP07510 517 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 ZNF735P0CB33 412 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 ZNF25P17030 456 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-247ENST00000557311 ANXA7P20073 488 aaKnown RBP4.22□□□□□ -1.73
ATXN3-247ENST00000557311 RAB3BP20337 219 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 C4BPBP20851 252 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 ME2P23368 584 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 PSMB6P28072 239 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 GTF2E2P29084 291 aaKnown RBP4.22□□□□□ -1.73
ATXN3-247ENST00000557311 FMO3P31513 532 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 OR3A2P47893 321 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 CLDN8P56748 225 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 PKIAP61925 76 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 PSG6Q00889 435 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 TNFRSF9Q07011 255 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 EPS8Q12929 822 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 PDIA2Q13087 525 aaKnown RBP4.22□□□□□ -1.73
ATXN3-247ENST00000557311 CBFBQ13951 182 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 IL18Q14116 193 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 P2RY14Q15391 338 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 MPPED2Q15777 294 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 ATP6AP1Q15904 470 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 DECR1Q16698 335 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 MICAQ29983 383 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 ACTBL2Q562R1 376 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 ARL13AQ5H913 290 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-247ENST00000557311 COQ5Q5HYK3 327 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 KHDC1LQ5JSQ8 128 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 DNLZQ5SXM8 178 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 AVPI1Q5T686 147 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 LPCAT3Q6P1A2 487 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 HAGHLQ6PII5 290 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-247ENST00000557311 PET117Q6UWS5 81 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 LRRN1Q6UXK5 716 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 DEF8Q6ZN54 512 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 KLBQ86Z14 1044 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 C8orf59Q8N0T1 100 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-247ENST00000557311 LRRC18Q8N456 261 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 ARRDC1Q8N5I2 433 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 EIF4E3Q8N5X7 224 aaKnown RBP4.22□□□□□ -1.73
ATXN3-247ENST00000557311 ZNF283Q8N7M2 679 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 L3MBTL4Q8NA19 623 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 ZNF383Q8NA42 475 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 TMEM104Q8NE00 496 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 OR5J2Q8NH18 312 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 NDNFQ8TB73 568 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 FAM110BQ8TC76 370 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 RNF128Q8TEB7 428 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 C16orf78Q8WTQ4 265 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 ABHD3Q8WU67 409 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 AP3S1Q92572 193 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 TMEM203Q969S6 136 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 OTULINQ96BN8 352 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 CNRIP1Q96F85 164 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-247ENST00000557311 ZNF764Q96H86 408 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-247ENST00000557311 ZNF479Q96JC4 524 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 HYLS1Q96M11 299 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 PACRGQ96M98 296 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-247ENST00000557311 THTPAQ9BU02 230 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 FAIM2Q9BWQ8 316 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 PRRG3Q9BZD7 231 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 TBL1XR1Q9BZK7 514 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 RTN4RQ9BZR6 473 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 HIPK2Q9H2X6 1198 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 REEP4Q9H6H4 257 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 ALG9Q9H6U8 611 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 FKRPQ9H9S5 495 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 NMRAL1Q9HBL8 299 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 ABCB9Q9NP78 766 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 MYNNQ9NPC7 610 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 TMEM138Q9NPI0 162 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-247ENST00000557311 MAN2C1Q9NTJ4 1040 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 ZCCHC3Q9NUD5 404 aaKnown RBP4.22□□□□□ -1.73
ATXN3-247ENST00000557311 MED9Q9NWA0 146 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 UTS2RQ9UKP6 389 aa4.22□□□□□ -1.73
ATXN3-247ENST00000557311 ELF5Q9UKW6 265 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms