RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 BTN2A1Q7KYR7 527 aa12.22□□□□□ -0.45
CHD8-211ENST00000556833 FAM90A1Q86YD7 464 aa12.22□□□□□ -0.45
CHD8-211ENST00000556833 OR56B2PQ8NGI1 322 aa12.22□□□□□ -0.45
CHD8-211ENST00000556833 FAM110DQ8TAY7 271 aaPredicted RBP12.22□□□□□ -0.45
CHD8-211ENST00000556833 SSMEM1Q8WWF3 244 aa12.22□□□□□ -0.45
CHD8-211ENST00000556833 ZNRF4Q8WWF5 429 aa12.22□□□□□ -0.45
CHD8-211ENST00000556833 C7orf34Q96L11 122 aa12.22□□□□□ -0.45
CHD8-211ENST00000556833 RBM4BQ9BQ04 359 aaKnown RBP12.22□□□□□ -0.45
CHD8-211ENST00000556833 SIRPDQ9H106 197 aa12.22□□□□□ -0.45
CHD8-211ENST00000556833 VIPAS39Q9H9C1 493 aa12.22□□□□□ -0.45
CHD8-211ENST00000556833 ONECUT1Q9UBC0 465 aa12.22□□□□□ -0.45
CHD8-211ENST00000556833 CYB5R1Q9UHQ9 305 aa12.22□□□□□ -0.45
CHD8-211ENST00000556833 A0A1B0GUS0 222 aa12.21□□□□□ -0.45
CHD8-211ENST00000556833 DVL1O14640 695 aa12.21□□□□□ -0.45
CHD8-211ENST00000556833 GADD45GO95257 159 aa12.21□□□□□ -0.45
CHD8-211ENST00000556833 ZNF823P16415 610 aa12.21□□□□□ -0.45
CHD8-211ENST00000556833 NPY4RP50391 375 aa12.21□□□□□ -0.45
CHD8-211ENST00000556833 PSME3P61289 254 aa12.21□□□□□ -0.45
CHD8-211ENST00000556833 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.21□□□□□ -0.45
CHD8-211ENST00000556833 CD276Q5ZPR3 534 aa12.21□□□□□ -0.45
CHD8-211ENST00000556833 ASPHD2Q6ICH7 369 aa12.21□□□□□ -0.45
CHD8-211ENST00000556833 C8orf82Q6P1X6 216 aaPredicted RBP12.21□□□□□ -0.45
CHD8-211ENST00000556833 VMO1Q7Z5L0 202 aa12.21□□□□□ -0.45
CHD8-211ENST00000556833 CELF2-AS1Q8N7Q2 184 aa12.21□□□□□ -0.45
CHD8-211ENST00000556833 PNLDC1Q8NA58 520 aaKnown RBP12.21□□□□□ -0.45
CHD8-211ENST00000556833 PROKR2Q8NFJ6 384 aa12.21□□□□□ -0.45
CHD8-211ENST00000556833 OR9Q1Q8NGQ5 310 aa12.21□□□□□ -0.45
CHD8-211ENST00000556833 LINC01006Q8NI28 216 aa12.21□□□□□ -0.45
CHD8-211ENST00000556833 SPTSSAQ969W0 71 aa12.21□□□□□ -0.45
CHD8-211ENST00000556833 SEH1LQ96EE3 360 aa12.21□□□□□ -0.45
CHD8-211ENST00000556833 FAM71F1Q96KD3 344 aaPredicted RBP12.21□□□□□ -0.45
CHD8-211ENST00000556833 HOPXQ9BPY8 73 aaPredicted RBP12.21□□□□□ -0.45
CHD8-211ENST00000556833 FUZQ9BT04 418 aa12.21□□□□□ -0.45
CHD8-211ENST00000556833 COPS4Q9BT78 406 aa12.21□□□□□ -0.45
CHD8-211ENST00000556833 TRIM15Q9C019 465 aa12.21□□□□□ -0.45
CHD8-211ENST00000556833 MMP27Q9H306 513 aa12.21□□□□□ -0.45
CHD8-211ENST00000556833 EGLN3Q9H6Z9 239 aa12.21□□□□□ -0.45
CHD8-211ENST00000556833 EFCAB1Q9HAE3 211 aa12.21□□□□□ -0.45
CHD8-211ENST00000556833 ARGLU1Q9NWB6 273 aaPredicted RBP12.21□□□□□ -0.45
CHD8-211ENST00000556833 TRAV38-1A0A0B4J264 116 aa12.2□□□□□ -0.46
CHD8-211ENST00000556833 TIMM23O14925 209 aa12.2□□□□□ -0.46
CHD8-211ENST00000556833 TBX1O43435 398 aa12.2□□□□□ -0.46
CHD8-211ENST00000556833 TFF1P04155 84 aa12.2□□□□□ -0.46
CHD8-211ENST00000556833 SPARCP09486 303 aa12.2□□□□□ -0.46
CHD8-211ENST00000556833 MSX2P35548 267 aaPredicted RBP12.2□□□□□ -0.46
CHD8-211ENST00000556833 ECH1Q13011 328 aa12.2□□□□□ -0.46
CHD8-211ENST00000556833 KLRD1Q13241 179 aa12.2□□□□□ -0.46
CHD8-211ENST00000556833 KCNJ8Q15842 424 aa12.2□□□□□ -0.46
CHD8-211ENST00000556833 ZBTB46Q86UZ6 589 aa12.2□□□□□ -0.46
CHD8-211ENST00000556833 PIP4P2Q8N4L2 257 aa12.2□□□□□ -0.46
CHD8-211ENST00000556833 TMEM86BQ8N661 226 aa12.2□□□□□ -0.46
CHD8-211ENST00000556833 GCSAMQ8N6F7 178 aa12.2□□□□□ -0.46
CHD8-211ENST00000556833 TBC1D15Q8TC07 691 aa12.2□□□□□ -0.46
CHD8-211ENST00000556833 ERGIC1Q969X5 290 aa12.2□□□□□ -0.46
CHD8-211ENST00000556833 DHRS1Q96LJ7 313 aa12.2□□□□□ -0.46
CHD8-211ENST00000556833 CCL13Q99616 98 aa12.2□□□□□ -0.46
CHD8-211ENST00000556833 PPP1R3EQ9H7J1 279 aa12.2□□□□□ -0.46
CHD8-211ENST00000556833 TCF7L1Q9HCS4 588 aa12.2□□□□□ -0.46
CHD8-211ENST00000556833 SIRT7Q9NRC8 400 aa12.2□□□□□ -0.46
CHD8-211ENST00000556833 CENPMQ9NSP4 180 aa12.2□□□□□ -0.46
CHD8-211ENST00000556833 DCAF13Q9NV06 445 aaKnown RBP12.2□□□□□ -0.46
CHD8-211ENST00000556833 POMT1Q9Y6A1 747 aa12.2□□□□□ -0.46
CHD8-211ENST00000556833 TET2Q6N021 2002 aaPredicted RBP12.2□□□□□ -0.46
CHD8-211ENST00000556833 SLC22A2O15244 555 aa12.19□□□□□ -0.46
CHD8-211ENST00000556833 FSTL3O95633 263 aa12.19□□□□□ -0.46
CHD8-211ENST00000556833 GYPBP06028 91 aa12.19□□□□□ -0.46
CHD8-211ENST00000556833 SELLP14151 372 aa12.19□□□□□ -0.46
CHD8-211ENST00000556833 H2AFXP16104 143 aaPredicted RBP12.19□□□□□ -0.46
CHD8-211ENST00000556833 RRM2P31350 389 aa12.19□□□□□ -0.46
CHD8-211ENST00000556833 CSNK2BP67870 215 aa12.19□□□□□ -0.46
CHD8-211ENST00000556833 IKZF1Q13422 519 aa12.19□□□□□ -0.46
CHD8-211ENST00000556833 PDCD1Q15116 288 aa12.19□□□□□ -0.46
CHD8-211ENST00000556833 TAF13Q15543 124 aa12.19□□□□□ -0.46
CHD8-211ENST00000556833 GFOD2Q3B7J2 385 aa12.19□□□□□ -0.46
CHD8-211ENST00000556833 DCXRQ7Z4W1 244 aa12.19□□□□□ -0.46
CHD8-211ENST00000556833 PNKDQ8N490 385 aa12.19□□□□□ -0.46
CHD8-211ENST00000556833 FAM216BQ8N7L0 139 aa12.19□□□□□ -0.46
CHD8-211ENST00000556833 LRRC29Q8WV35 223 aa12.19□□□□□ -0.46
CHD8-211ENST00000556833 DYRK2Q92630 601 aa12.19□□□□□ -0.46
CHD8-211ENST00000556833 SAMD4AQ9UPU9 718 aaKnown RBP12.19□□□□□ -0.46
CHD8-211ENST00000556833 A0A0G2JK05 382 aa12.18□□□□□ -0.46
CHD8-211ENST00000556833 BHLHE40O14503 412 aa12.18□□□□□ -0.46
CHD8-211ENST00000556833 ARPC3O15145 178 aa12.18□□□□□ -0.46
CHD8-211ENST00000556833 GMDSO60547 372 aa12.18□□□□□ -0.46
CHD8-211ENST00000556833 IER3P46695 156 aa12.18□□□□□ -0.46
CHD8-211ENST00000556833 PROK1P58294 105 aa12.18□□□□□ -0.46
CHD8-211ENST00000556833 BPIFB3P59826 476 aa12.18□□□□□ -0.46
CHD8-211ENST00000556833 TAF9Q16594 264 aa12.18□□□□□ -0.46
CHD8-211ENST00000556833 PCK2Q16822 640 aa12.18□□□□□ -0.46
CHD8-211ENST00000556833 WDR38Q5JTN6 314 aa12.18□□□□□ -0.46
CHD8-211ENST00000556833 Q6ZSV7 163 aa12.18□□□□□ -0.46
CHD8-211ENST00000556833 WDR86Q86TI4 376 aa12.18□□□□□ -0.46
CHD8-211ENST00000556833 OR9Q2Q8NGE9 314 aa12.18□□□□□ -0.46
CHD8-211ENST00000556833 OR5T2Q8NGG2 359 aa12.18□□□□□ -0.46
CHD8-211ENST00000556833 OR8S1Q8NH09 359 aa12.18□□□□□ -0.46
CHD8-211ENST00000556833 ABCD2Q9UBJ2 740 aa12.18□□□□□ -0.46
CHD8-211ENST00000556833 FAM96BQ9Y3D0 163 aa12.18□□□□□ -0.46
CHD8-211ENST00000556833 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.17□□□□□ -0.46
CHD8-211ENST00000556833 GMNNO75496 209 aa12.17□□□□□ -0.46
CHD8-211ENST00000556833 LIPFP07098 398 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms