RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 OR10H3O60404 316 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 GMDSO60547 372 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 NDUFB2O95178 105 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 OPN1MWP04001 364 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 LCATP04180 440 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 FBP1P09467 338 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 ACSM4P0C7M7 580 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 OPN1MW2P0DN77 364 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 OPN1MW3P0DN78 364 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 CDKN2AP42771 156 aaKnown RBP10.43□□□□□ -0.74
SHMT2-223ENST00000556689 LIPEQ05469 1076 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 ECH1Q13011 328 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 MEP1BQ16820 701 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 KRTAP27-1Q3LI81 207 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 KPRPQ5T749 579 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-223ENST00000556689 Q6ZPA2 131 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 REC114Q7Z4M0 266 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 VMO1Q7Z5L0 202 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 ADCK1Q86TW2 530 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 C10orf67Q8IYJ2 551 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 TMEM5Q9Y2B1 443 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 KPTNQ9Y664 436 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 A0A1B0GVI7 797 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 ANKRD61A6NGH8 418 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 CD300LBA8K4G0 201 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 NME4O00746 187 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 PIN1P1O15428 100 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 PTBP3O95758 552 aaKnown RBP10.42□□□□□ -0.74
SHMT2-223ENST00000556689 PRB2P02812 416 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-223ENST00000556689 GRPP07492 148 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 HSD17B1P14061 328 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 FAM189A2Q15884 450 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 C1orf146Q5VVC0 180 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 SLC35E4Q6ICL7 350 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 C8orf82Q6P1X6 216 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-223ENST00000556689 DNM1P34Q6PK57 102 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 DPY19L2P2Q6ZN68 376 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 Q6ZTK2 550 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 PTCHD4Q6ZW05 846 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 MRPL21Q7Z2W9 205 aaKnown RBP10.42□□□□□ -0.74
SHMT2-223ENST00000556689 VTCN1Q7Z7D3 282 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 GALNT4Q8N4A0 578 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 SLC7A6OSQ96CW6 309 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-223ENST00000556689 ASB9Q96DX5 294 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 TSSK2Q96PF2 358 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 GPX7Q96SL4 187 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-223ENST00000556689 SRA1Q9HD15 236 aaKnown RBP10.42□□□□□ -0.74
SHMT2-223ENST00000556689 C1orf123Q9NWV4 160 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 FBLN5Q9UBX5 448 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 RPUSD1Q9UJJ7 312 aaKnown RBP10.42□□□□□ -0.74
SHMT2-223ENST00000556689 VPREB3Q9UKI3 123 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 B9D1Q9UPM9 204 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 AURKCQ9UQB9 309 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 SIGLEC7Q9Y286 467 aa10.42□□□□□ -0.74
SHMT2-223ENST00000556689 DCTN6O00399 190 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 GPR37O15354 613 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 GSC2O15499 205 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 FCN3O75636 299 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 PPP1R3DO95685 299 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 TXNDC12O95881 172 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 GGT2P36268 569 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 GSK3BP49841 420 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 RPS6KA3P51812 740 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 TPTEP56180 551 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 GUCA2AQ02747 115 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 POU4F2Q12837 409 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 TRAP1Q12931 704 aaKnown RBP10.41□□□□□ -0.74
SHMT2-223ENST00000556689 FLOT2Q14254 428 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 HERPUD1Q15011 391 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 SAMD5Q5TGI4 173 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 SLC18B1Q6NT16 456 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 METAP1DQ6UB28 335 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-223ENST00000556689 CFAP77Q6ZQR2 320 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 FKBP9P1Q75LS8 142 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 ASRGL1Q7L266 308 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 TSEN54Q7Z6J9 526 aaKnown RBP10.41□□□□□ -0.74
SHMT2-223ENST00000556689 FAM90A1Q86YD7 464 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 SLC15A3Q8IY34 581 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 SPERTQ8NA61 448 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 OR2AJ1Q8NGZ0 328 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 ST8SIA4Q92187 359 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 STMN2Q93045 179 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 FAM162AQ96A26 154 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 FAM46AQ96IP4 442 aaKnown RBP10.41□□□□□ -0.74
SHMT2-223ENST00000556689 ATF6BQ99941 703 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 ADAT1Q9BUB4 502 aaKnown RBP10.41□□□□□ -0.74
SHMT2-223ENST00000556689 SEMA6AQ9H2E6 1030 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 ANKRD19PQ9H560 264 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 ZNRD1Q9P1U0 126 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 ONECUT1Q9UBC0 465 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 KAAG1Q9UBP8 84 aa10.41□□□□□ -0.74
SHMT2-223ENST00000556689 IGLV1-36A0A0B4J1U3 117 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 hCG_1807616A0A1W2PRN6 198 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 GGT3PA6NGU5 568 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 A6NLC8 198 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 ZNF682O95780 498 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 LHBP01229 141 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 HOXB6P17509 224 aaKnown RBP10.4□□□□□ -0.74
SHMT2-223ENST00000556689 EEF1B2P24534 225 aaKnown RBP10.4□□□□□ -0.74
SHMT2-223ENST00000556689 MZT1Q08AG7 82 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms