RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 GLIPR1L1Q6UWM5 242 aa8.89□□□□□ -0.99
TMEM260-211ENST00000556648 HIST2H3AQ71DI3 136 aa8.89□□□□□ -0.99
TMEM260-211ENST00000556648 DOK3Q7L591 496 aa8.89□□□□□ -0.99
TMEM260-211ENST00000556648 GVQW1Q8N7I0 195 aa8.89□□□□□ -0.99
TMEM260-211ENST00000556648 CHST4Q8NCG5 386 aa8.89□□□□□ -0.99
TMEM260-211ENST00000556648 KCNE4Q8WWG9 221 aa8.89□□□□□ -0.99
TMEM260-211ENST00000556648 AQP3Q92482 292 aa8.89□□□□□ -0.99
TMEM260-211ENST00000556648 UQCC2Q9BRT2 126 aa8.89□□□□□ -0.99
TMEM260-211ENST00000556648 BANF2Q9H503 90 aa8.89□□□□□ -0.99
TMEM260-211ENST00000556648 TAS2R8Q9NYW2 309 aa8.89□□□□□ -0.99
TMEM260-211ENST00000556648 EMC3Q9P0I2 261 aa8.89□□□□□ -0.99
TMEM260-211ENST00000556648 PIPOXQ9P0Z9 390 aa8.89□□□□□ -0.99
TMEM260-211ENST00000556648 LRFN1Q9P244 771 aa8.89□□□□□ -0.99
TMEM260-211ENST00000556648 ING4Q9UNL4 249 aa8.89□□□□□ -0.99
TMEM260-211ENST00000556648 MRPS28Q9Y2Q9 187 aaKnown RBP8.89□□□□□ -0.99
TMEM260-211ENST00000556648 FAM166BA8MTA8 275 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 TMEM14DPA8MWL7 114 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 RAB3DO95716 219 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 IL5P05113 134 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 HCKP08631 526 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 ZNF735P0CB33 412 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 GNB3P16520 340 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 FAHP16930 419 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 CNR1P21554 472 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 GFRA1P56159 465 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 ACTBP60709 375 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 ACTG1P63261 375 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 SNAI3Q3KNW1 292 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 ATP1A1-AS1Q5TC04 95 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 RHOUQ7L0Q8 258 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 TRAPPC6BQ86SZ2 158 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 TMEM229BQ8NBD8 167 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 GJC3Q8NFK1 279 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 OR5D18Q8NGL1 313 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 LILRB4Q8NHJ6 448 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 ABHD3Q8WU67 409 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 PTX4Q96A99 478 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 GPR137Q96N19 417 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 CRLF2Q9HC73 371 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 KMT2EQ8IZD2 1858 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 NCOR1O75376 2440 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 SULT1C2O00338 296 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 CREBL2O60519 120 aaPredicted RBP8.88□□□□□ -0.99
TMEM260-211ENST00000556648 SIX6O95475 246 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 MPIG6BO95866 241 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 NR2C1P13056 603 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 B4GALT1P15291 398 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 DNASE1P24855 282 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 CTSSP25774 331 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 SSTR2P30874 369 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 ZNF84P51523 738 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 TAS2R19P59542 299 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 MRPS34P82930 218 aaKnown RBP8.88□□□□□ -0.99
TMEM260-211ENST00000556648 NDUFA5Q16718 116 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 CDNFQ49AH0 187 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 OR52W1Q6IF63 320 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 ZNF774Q6NX45 483 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 C17orf107Q6ZR85 190 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 LINC00696Q6ZRV3 163 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 AAED1Q7RTV5 226 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 ZNF101Q8IZC7 436 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 OR2M7Q8NG81 312 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 OR2T35Q8NGX2 323 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 FGFBP3Q8TAT2 258 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 ADAMTS17Q8TE56 1095 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 SSC4DQ8WTU2 575 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 PNPLA2Q96AD5 504 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 SF3B5Q9BWJ5 86 aaKnown RBP8.88□□□□□ -0.99
TMEM260-211ENST00000556648 GON7Q9BXV9 100 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 LPAR5Q9H1C0 372 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 SCPEP1Q9HB40 452 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 PLEK2Q9NYT0 353 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 SCP2D1Q9UJQ7 156 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 ITGB1BP2Q9UKP3 347 aa8.88□□□□□ -0.99
TMEM260-211ENST00000556648 CNTRLQ7Z7A1 2325 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 A0A0A6YYH2 397 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 A6NJ64 397 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 M0R135 149 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 ERVH48-1M5A8F1 160 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 DNPH1O43598 174 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 SSX5O60225 188 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 TNFSF15O95150 251 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 AMY2AP04746 511 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 ITGA3P26006 1051 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 OTX1P32242 354 aaPredicted RBP8.87□□□□□ -0.99
TMEM260-211ENST00000556648 GUCA1AP43080 201 aaPredicted RBP8.87□□□□□ -0.99
TMEM260-211ENST00000556648 SSBP1Q04837 148 aaKnown RBP8.87□□□□□ -0.99
TMEM260-211ENST00000556648 SRYQ05066 204 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 NKPD1Q17RQ9 610 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 LGALSLQ3ZCW2 172 aaPredicted RBP8.87□□□□□ -0.99
TMEM260-211ENST00000556648 C6orf183Q5T699 404 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 CHMP1BQ7LBR1 199 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 C1QL2Q7Z5L3 287 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 AKR7LQ8NHP1 331 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 ZNF799Q96GE5 643 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 SLC6A7Q99884 636 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 SELENOIQ9C0D9 397 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 SLC6A15Q9H2J7 730 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 POFUT1Q9H488 388 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 RANBP3Q9H6Z4 567 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms