RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 OR2T33Q8NG76 320 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 APH1BQ8WW43 257 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 ST8SIA1Q92185 356 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 SMPDL3BQ92485 455 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 PIK3R3Q92569 461 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 RPL3LQ92901 407 aaKnown RBP4.47□□□□□ -1.69
SRP54-211ENST00000556445 TNFRSF14Q92956 283 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 ERGIC1Q969X5 290 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 OTULINQ96BN8 352 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 YIPF6Q96EC8 236 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 MRPL48Q96GC5 212 aaKnown RBP4.47□□□□□ -1.69
SRP54-211ENST00000556445 TMEM80Q96HE8 168 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 LURAP1Q96LR2 239 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 SGK494Q96LW2 274 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 GFM1Q96RP9 751 aaKnown RBP4.47□□□□□ -1.69
SRP54-211ENST00000556445 MND1Q9BWT6 205 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 TSSK6Q9BXA6 273 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 LRRN3Q9H3W5 708 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 GAREM1Q9H706 876 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 SIAEQ9HAT2 523 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 C12orf10Q9HB07 376 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 ISYNA1Q9NPH2 558 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 EXOSC3Q9NQT5 275 aaKnown RBP4.47□□□□□ -1.69
SRP54-211ENST00000556445 UBQLN4Q9NRR5 601 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 UFSP2Q9NUQ7 469 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 PAK1IP1Q9NWT1 392 aaPredicted RBP4.47□□□□□ -1.69
SRP54-211ENST00000556445 TVP23BQ9NYZ1 205 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 NPAP1Q9NZP6 1156 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 SEC14L4Q9UDX3 406 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 C19orf25Q9UFG5 118 aaPredicted RBP4.47□□□□□ -1.69
SRP54-211ENST00000556445 NXT1Q9UKK6 140 aaKnown RBP4.47□□□□□ -1.69
SRP54-211ENST00000556445 DIMT1Q9UNQ2 313 aaKnown RBP4.47□□□□□ -1.69
SRP54-211ENST00000556445 WDR83OSQ9Y284 106 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 TMED7Q9Y3B3 224 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 CABIN1Q9Y6J0 2220 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 NUP210LQ5VU65 1888 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 SEC16AO15027 2179 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 PCDH15Q96QU1 1955 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 A0A0B4J2E0 115 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 TMEM272A0A1B0GTI8 110 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 A0A1B0GWA3 101 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 A0A1B0GX12 115 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 TUBAL3A6NHL2 446 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 A8MU76 341 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 NPIPB9F8W1W9 429 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 TMX2-CTNND1H3BSU7 103 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 WWP2O00308 870 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 SULT1B1O43704 296 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 IDH3BO43837 385 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 EIF4E2O60573 245 aaKnown RBP4.46□□□□□ -1.7
SRP54-211ENST00000556445 CLN5O75503 358 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 REM1O75628 298 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 CDC123O75794 336 aaPredicted RBP4.46□□□□□ -1.7
SRP54-211ENST00000556445 NDUFB4O95168 129 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 NDUFA7O95182 113 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 IFNGP01579 166 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 IGKV3-11P04433 115 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 STSP08842 583 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 CT45A8P0DMV1 189 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 CT45A9P0DMV2 189 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 IFI30P13284 250 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 FOLR1P15328 257 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 CD36P16671 472 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 NAGAP17050 411 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 TBXA2RP21731 343 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 OTX1P32242 354 aaPredicted RBP4.46□□□□□ -1.7
SRP54-211ENST00000556445 UGT2B10P36537 528 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 EIF2S3P41091 472 aaKnown RBP4.46□□□□□ -1.7
SRP54-211ENST00000556445 ETV5P41161 510 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 OR1D4P47884 311 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 GLIPR1P48060 266 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 RFX3P48380 749 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 TMED10P49755 219 aaKnown RBP4.46□□□□□ -1.7
SRP54-211ENST00000556445 NANOS2P60321 138 aaKnown RBP4.46□□□□□ -1.7
SRP54-211ENST00000556445 PRPS1P60891 318 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 DCDP81605 110 aaKnown RBP4.46□□□□□ -1.7
SRP54-211ENST00000556445 INPP5JQ15735 1006 aaPredicted RBP4.46□□□□□ -1.7
SRP54-211ENST00000556445 EXT1Q16394 746 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 MAPK14Q16539 360 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 MOGQ16653 247 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 PGGHGQ32M88 737 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 ODF3L2Q3SX64 289 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 LINC01620Q4KN68 170 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 CT45A2Q5DJT8 189 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 ARMCX4Q5H9R4 360 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 ALG10BQ5I7T1 473 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 PIK3CD-AS1Q5SR53 167 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 LIPNQ5VXI9 398 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 NXNL2Q5VZ03 156 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 TMEM236Q5W0B7 351 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 C5orf46Q6UWT4 87 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 RTL4Q6ZR62 310 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 USP43Q70EL4 1123 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 BHLHA15Q7RTS1 189 aaPredicted RBP4.46□□□□□ -1.7
SRP54-211ENST00000556445 SSX9Q7RTT3 188 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 OLIG3Q7RTU3 272 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 NRMQ8IXM6 262 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 SLC34A3Q8N130 599 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 TMEM123Q8N131 208 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 OR5L2Q8NGL0 311 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms