RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 RPL36A-HNRNPH2H7BZ11 118 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 TAAR5O14804 337 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 SIVA1O15304 175 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 AKR7A2O43488 359 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 CHST10O43529 356 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 CDC40O60508 579 aaKnown RBP eCLIP1.53□□□□□ -2.16
SCFD1-218ENST00000556256 SLC16A7O60669 478 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 RAD1O60671 282 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 RBBP9O75884 186 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 IGLV3-25P01717 112 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 GLAP06280 429 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 ZNF688P0C7X2 276 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 ZNF806P0C7X5 589 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 CD37P11049 281 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 ME2P23368 584 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 CD82P27701 267 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 HTR1DP28221 377 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 SERPINB8P50452 374 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 PPIDQ08752 370 aaKnown RBP1.53□□□□□ -2.16
SCFD1-218ENST00000556256 ZNF616Q08AN1 781 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 SLC39A6Q13433 755 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 PNOCQ13519 176 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 RBMY1FQ15415 496 aaKnown RBP1.53□□□□□ -2.16
SCFD1-218ENST00000556256 PRSS8Q16651 343 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 ZNF829Q3KNS6 432 aaPredicted RBP1.53□□□□□ -2.16
SCFD1-218ENST00000556256 TTC41PQ6P2S7 1318 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 UNQ9165/PRO28630Q6UXU0 137 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 NEGR1Q7Z3B1 354 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 VKORC1L1Q8N0U8 176 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 RNF182Q8N6D2 247 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 SNX31Q8N9S9 440 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 C19orf18Q8NEA5 215 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 AGR3Q8TD06 166 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 GPX8Q8TED1 209 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 PEX13Q92968 403 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 HAUS1Q96CS2 278 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 KCNS1Q96KK3 526 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 C9orf72Q96LT7 481 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 LINC00477Q96M19 166 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 C18orf15Q96N68 181 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 GPR21Q99679 349 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 AGMATQ9BSE5 352 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 TIMM29Q9BSF4 260 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 RSG1Q9BU20 258 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 TMEM243Q9BU79 118 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 CALN1Q9BXU9 219 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 TOLLIPQ9H0E2 274 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 ING2Q9H160 280 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 NCOR1P1Q9H4R4 102 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 EXOSC4Q9NPD3 245 aaKnown RBP1.53□□□□□ -2.16
SCFD1-218ENST00000556256 PRSS16Q9NQE7 514 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 RRAGDQ9NQL2 400 aaPredicted RBP1.53□□□□□ -2.16
SCFD1-218ENST00000556256 RGS18Q9NS28 235 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 YEATS2Q9ULM3 1422 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 ZNF257Q9Y2Q1 563 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 UBIAD1Q9Y5Z9 338 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 ADGRA3Q8IWK6 1321 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 CENPVL3A0A0U1RRI6 287 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 A0A1B0GTQ1 180 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 A0A1B0GUH1 482 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 NCF1BA6NI72 391 aaPredicted RBP1.52□□□□□ -2.17
SCFD1-218ENST00000556256 OR5H1A6NKK0 313 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 C17orf51A8MQB3 221 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 SYCE1LA8MT33 242 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 NCF1CA8MVU1 366 aaPredicted RBP1.52□□□□□ -2.17
SCFD1-218ENST00000556256 XRCC2O43543 280 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 CTNSO60931 367 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 TDP2O95551 362 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 DCNP07585 359 aaKnown RBP1.52□□□□□ -2.17
SCFD1-218ENST00000556256 TUBG1P23258 451 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 MAGEA1P43355 309 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 CACNG7P62955 275 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 PITPNAQ00169 270 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 ZNF33AQ06730 810 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 GABRA6Q16445 453 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 TEX30Q5JUR7 227 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 PIP5KL1Q5T9C9 394 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 AP1ARQ63HQ0 302 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 RTL4Q6ZR62 310 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 LINC00336Q6ZUF6 198 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 OTUD6AQ7L8S5 288 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 TMEM256Q8N2U0 113 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 CSGALNACT2Q8N6G5 542 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 TTLQ8NG68 377 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 OR4M1Q8NGD0 313 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 ITFG1Q8TB96 612 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 RAB1CQ92928 201 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 FAM19A4Q96LR4 140 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 TEAD3Q99594 435 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 DEFB129Q9H1M3 183 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 C8orf33Q9H7E9 229 aaPredicted RBP1.52□□□□□ -2.17
SCFD1-218ENST00000556256 TUBG2Q9NRH3 451 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 DDX18Q9NVP1 670 aaKnown RBP1.52□□□□□ -2.17
SCFD1-218ENST00000556256 MRPL22Q9NWU5 206 aaKnown RBP1.52□□□□□ -2.17
SCFD1-218ENST00000556256 RABL2AQ9UBK7 228 aaPredicted RBP1.52□□□□□ -2.17
SCFD1-218ENST00000556256 PEF1Q9UBV8 284 aaKnown RBP1.52□□□□□ -2.17
SCFD1-218ENST00000556256 PSME2Q9UL46 239 aa1.52□□□□□ -2.17
SCFD1-218ENST00000556256 PCM1Q15154 2024 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 TMEM120BA0PK00 339 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 SLC22A20A6NK97 555 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms