RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 DBHP09172 617 aa12.86□□□□□ -0.35
VPS33B-205ENST00000556096 FAM87AP0C7U9 286 aa12.86□□□□□ -0.35
VPS33B-205ENST00000556096 ARSBP15848 533 aa12.86□□□□□ -0.35
VPS33B-205ENST00000556096 ARF1P84077 181 aaKnown RBP12.86□□□□□ -0.35
VPS33B-205ENST00000556096 PLA2G7Q13093 441 aa12.86□□□□□ -0.35
VPS33B-205ENST00000556096 LINC00303Q3SY05 128 aa12.86□□□□□ -0.35
VPS33B-205ENST00000556096 ADGRE4PQ86SQ3 457 aa12.86□□□□□ -0.35
VPS33B-205ENST00000556096 JAGN1Q8N5M9 183 aa12.86□□□□□ -0.35
VPS33B-205ENST00000556096 SLC7A6Q92536 515 aa12.86□□□□□ -0.35
VPS33B-205ENST00000556096 C10orf35Q96D05 121 aa12.86□□□□□ -0.35
VPS33B-205ENST00000556096 SOX7Q9BT81 388 aa12.86□□□□□ -0.35
VPS33B-205ENST00000556096 METTL17Q9H7H0 456 aaPredicted RBP12.86□□□□□ -0.35
VPS33B-205ENST00000556096 DIABLOQ9NR28 239 aa12.86□□□□□ -0.35
VPS33B-205ENST00000556096 UPB1Q9UBR1 384 aa12.86□□□□□ -0.35
VPS33B-205ENST00000556096 TMEM272A0A1B0GTI8 110 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 C5orf63A6NC05 138 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 K7EM74 188 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 MTRF1O75570 445 aaKnown RBP12.85□□□□□ -0.35
VPS33B-205ENST00000556096 CTAG2O75638 210 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 DHRS3O75911 302 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 ALX3O95076 343 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 TGM6O95932 706 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 CD3GP09693 182 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 GABRA1P14867 456 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 ABOP16442 354 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 TAS2R20P59543 309 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 GPR176Q14439 515 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 DNM1P46Q6ZS02 220 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 NUFIP2Q7Z417 695 aaKnown RBP12.85□□□□□ -0.35
VPS33B-205ENST00000556096 ZNF100Q8IYN0 542 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 TOMM5Q8N4H5 51 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 OR52N4Q8NGI2 321 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 OR13C9Q8NGT0 318 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 AKR7LQ8NHP1 331 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 FGFBP3Q8TAT2 258 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 ITPKCQ96DU7 683 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 C7orf50Q9BRJ6 194 aaKnown RBP12.85□□□□□ -0.35
VPS33B-205ENST00000556096 PLSCR2Q9NRY7 297 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 GLRX2Q9NS18 164 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 ATMQ13315 3056 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 ZNF407Q9C0G0 2248 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 FAM240BA0A1B0GVZ2 78 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 DHRS7CA6NNS2 312 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 PATE4P0C8F1 98 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 TMIGD3P0DMS9 266 aaPredicted RBP12.85□□□□□ -0.35
VPS33B-205ENST00000556096 AGTR1P30556 359 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 THBS4P35443 961 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 HTR5AP47898 357 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 EFNB2P52799 333 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 DYRK1AQ13627 763 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 ZNF169Q14929 603 aaPredicted RBP12.85□□□□□ -0.35
VPS33B-205ENST00000556096 OR5AS1Q8N127 324 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 UBE2J2Q8N2K1 259 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 FCAMRQ8WWV6 532 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 CNTD2Q9H8S5 307 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 ZNF391Q9UJN7 358 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 CACNG2Q9Y698 323 aa12.85□□□□□ -0.35
VPS33B-205ENST00000556096 A0A0A6YYH2 397 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 CIB4A0PJX0 185 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 GGT3PA6NGU5 568 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 A6NJ64 397 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 CENPXA8MT69 81 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 ORC5O43913 435 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 PDGFAP04085 211 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 HNRNPCP07910 306 aaKnown RBP eCLIP12.84□□□□□ -0.35
VPS33B-205ENST00000556096 RAB6AP20340 208 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 SLC6A1P30531 599 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 GFOD2Q3B7J2 385 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 PLET1Q6UQ28 207 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 OR4D6Q8NGJ1 314 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 PP6455Q8WZ26 134 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 PHF21AQ96BD5 680 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 SGK3Q96BR1 496 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 SARAFQ96BY9 339 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 GMPPAQ96IJ6 420 aaPredicted RBP12.84□□□□□ -0.35
VPS33B-205ENST00000556096 MMP28Q9H239 520 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 RNF121Q9H920 327 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 ETAA1Q9NY74 926 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 ZNF224Q9NZL3 707 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 NPAP1Q9NZP6 1156 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 CLCF1Q9UBD9 225 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 FBLN5Q9UBX5 448 aa12.84□□□□□ -0.35
VPS33B-205ENST00000556096 RBMX2Q9Y388 322 aaKnown RBP12.84□□□□□ -0.35
VPS33B-205ENST00000556096 SS18L1O75177 396 aaPredicted RBP12.83□□□□□ -0.36
VPS33B-205ENST00000556096 BPNT1O95861 308 aa12.83□□□□□ -0.36
VPS33B-205ENST00000556096 ECDO95905 644 aaPredicted RBP12.83□□□□□ -0.36
VPS33B-205ENST00000556096 COX5BP10606 129 aa12.83□□□□□ -0.36
VPS33B-205ENST00000556096 ZNF93P35789 620 aaPredicted RBP12.83□□□□□ -0.36
VPS33B-205ENST00000556096 GDNFP39905 211 aa12.83□□□□□ -0.36
VPS33B-205ENST00000556096 FAPQ12884 760 aa12.83□□□□□ -0.36
VPS33B-205ENST00000556096 KLF9Q13886 244 aaPredicted RBP12.83□□□□□ -0.36
VPS33B-205ENST00000556096 SNAI3Q3KNW1 292 aa12.83□□□□□ -0.36
VPS33B-205ENST00000556096 PABPC1L2AQ5JQF8 200 aa12.83□□□□□ -0.36
VPS33B-205ENST00000556096 SFRP5Q5T4F7 317 aa12.83□□□□□ -0.36
VPS33B-205ENST00000556096 UTS2BQ765I0 119 aa12.83□□□□□ -0.36
VPS33B-205ENST00000556096 KRT74Q7RTS7 529 aa12.83□□□□□ -0.36
VPS33B-205ENST00000556096 FGD2Q7Z6J4 655 aa12.83□□□□□ -0.36
VPS33B-205ENST00000556096 BIVMQ86UB2 503 aa12.83□□□□□ -0.36
VPS33B-205ENST00000556096 SIAH3Q8IW03 269 aa12.83□□□□□ -0.36
VPS33B-205ENST00000556096 OR52I2Q8NH67 350 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms