RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 SAMD8Q96LT4 415 aa5.64□□□□□ -1.51
PSEN1-216ENST00000556066 COG8Q96MW5 612 aa5.64□□□□□ -1.51
PSEN1-216ENST00000556066 ERMAPQ96PL5 475 aaPredicted RBP5.64□□□□□ -1.51
PSEN1-216ENST00000556066 OR2V2Q96R30 315 aa5.64□□□□□ -1.51
PSEN1-216ENST00000556066 JMJD8Q96S16 334 aa5.64□□□□□ -1.51
PSEN1-216ENST00000556066 CIB1Q99828 191 aa5.64□□□□□ -1.51
PSEN1-216ENST00000556066 SUCNR1Q9BXA5 334 aa5.64□□□□□ -1.51
PSEN1-216ENST00000556066 VCXQ9H320 206 aa5.64□□□□□ -1.51
PSEN1-216ENST00000556066 WDR76Q9H967 626 aa5.64□□□□□ -1.51
PSEN1-216ENST00000556066 NRIP3Q9NQ35 241 aa5.64□□□□□ -1.51
PSEN1-216ENST00000556066 MMP26Q9NRE1 261 aa5.64□□□□□ -1.51
PSEN1-216ENST00000556066 TUBG2Q9NRH3 451 aa5.64□□□□□ -1.51
PSEN1-216ENST00000556066 DCAF13Q9NV06 445 aaKnown RBP5.64□□□□□ -1.51
PSEN1-216ENST00000556066 VSX1Q9NZR4 365 aaPredicted RBP5.64□□□□□ -1.51
PSEN1-216ENST00000556066 SCOCQ9UIL1 159 aa5.64□□□□□ -1.51
PSEN1-216ENST00000556066 SAMD4AQ9UPU9 718 aaKnown RBP5.64□□□□□ -1.51
PSEN1-216ENST00000556066 TRRAPQ9Y4A5 3859 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 OR6C6A6NF89 314 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 H0YJX3 145 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 DCTN6O00399 190 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 OR10H3O60404 316 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 TMEM127O75204 238 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 GADD45GO95257 159 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 RENP00797 406 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 IGHV2-70P01814 119 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 HLA-DQA2P01906 255 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 FASP25445 335 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 CRABP1P29762 137 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 SLC6A6P31641 620 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 MDH2P40926 338 aaKnown RBP5.63□□□□□ -1.51
PSEN1-216ENST00000556066 SMIM11AP58511 58 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 FXYD6P3P58550 94 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 SEC61A1P61619 476 aaKnown RBP5.63□□□□□ -1.51
PSEN1-216ENST00000556066 BTG1P62324 171 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 MRPL28Q13084 256 aaKnown RBP5.63□□□□□ -1.51
PSEN1-216ENST00000556066 ZMYND11Q15326 602 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 ATP6AP1Q15904 470 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 ESCO2Q56NI9 601 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 ARMCX4Q5H9R4 360 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 LEG1Q6P5S2 330 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 RBMS3Q6XE24 437 aaKnown RBP5.63□□□□□ -1.51
PSEN1-216ENST00000556066 ZBTB49Q6ZSB9 765 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 USP43Q70EL4 1123 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 ZDHHC13Q8IUH4 622 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 LINC00346Q8IVM7 164 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 ZNF283Q8N7M2 679 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 PAPD5Q8NDF8 572 aaKnown RBP5.63□□□□□ -1.51
PSEN1-216ENST00000556066 GJC3Q8NFK1 279 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 OR13G1Q8NGZ3 307 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 OR4K13Q8NH42 304 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 ZNF420Q8TAQ5 688 aaPredicted RBP5.63□□□□□ -1.51
PSEN1-216ENST00000556066 FAM216AQ8WUB2 273 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 RNF141Q8WVD5 230 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 APOBEC3DQ96AK3 386 aaPredicted RBP5.63□□□□□ -1.51
PSEN1-216ENST00000556066 CENPNQ96H22 339 aaPredicted RBP5.63□□□□□ -1.51
PSEN1-216ENST00000556066 PYURFQ96I23 114 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 C7orf34Q96L11 122 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 CNBD2Q96M20 576 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 NSMCE2Q96MF7 247 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 ZNF582Q96NG8 517 aaPredicted RBP5.63□□□□□ -1.51
PSEN1-216ENST00000556066 GPX7Q96SL4 187 aaPredicted RBP5.63□□□□□ -1.51
PSEN1-216ENST00000556066 NMNAT3Q96T66 252 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 PITX2Q99697 317 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 GPA33Q99795 319 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 IFT27Q9BW83 186 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 RBM4Q9BWF3 364 aaKnown RBP5.63□□□□□ -1.51
PSEN1-216ENST00000556066 CDADC1Q9BWV3 514 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 HDHD2Q9H0R4 259 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 OR52D1Q9H346 318 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 FN3KQ9H479 309 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 PATZ1Q9HBE1 687 aaKnown RBP5.63□□□□□ -1.51
PSEN1-216ENST00000556066 GCM1Q9NP62 436 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 RPRD1BQ9NQG5 326 aaKnown RBP5.63□□□□□ -1.51
PSEN1-216ENST00000556066 DDX28Q9NUL7 540 aaKnown RBP5.63□□□□□ -1.51
PSEN1-216ENST00000556066 IL19Q9UHD0 177 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 OPN4Q9UHM6 478 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 PPIAL4AQ9Y536 164 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 LHFPL6Q9Y693 200 aa5.63□□□□□ -1.51
PSEN1-216ENST00000556066 IGLV1-36A0A0B4J1U3 117 aa5.62□□□□□ -1.51
PSEN1-216ENST00000556066 A6NLC8 198 aa5.62□□□□□ -1.51
PSEN1-216ENST00000556066 CEACAM18A8MTB9 384 aa5.62□□□□□ -1.51
PSEN1-216ENST00000556066 F5H5K5 113 aa5.62□□□□□ -1.51
PSEN1-216ENST00000556066 F5H5P2 479 aa5.62□□□□□ -1.51
PSEN1-216ENST00000556066 H0YL77 283 aa5.62□□□□□ -1.51
PSEN1-216ENST00000556066 TRAPPC2LH3BP13 241 aa5.62□□□□□ -1.51
PSEN1-216ENST00000556066 TMEM178BH3BS89 294 aa5.62□□□□□ -1.51
PSEN1-216ENST00000556066 DLGAP1O14490 977 aa5.62□□□□□ -1.51
PSEN1-216ENST00000556066 TXNDC12O95881 172 aa5.62□□□□□ -1.51
PSEN1-216ENST00000556066 CYB5R3P00387 301 aaPredicted RBP5.62□□□□□ -1.51
PSEN1-216ENST00000556066 CSTBP04080 98 aaKnown RBP5.62□□□□□ -1.51
PSEN1-216ENST00000556066 HLA-DPB1P04440 258 aa5.62□□□□□ -1.51
PSEN1-216ENST00000556066 HIST1H1CP16403 213 aaKnown RBP5.62□□□□□ -1.51
PSEN1-216ENST00000556066 SELEP16581 610 aa5.62□□□□□ -1.51
PSEN1-216ENST00000556066 SLC6A9P48067 706 aa5.62□□□□□ -1.51
PSEN1-216ENST00000556066 HSPA13P48723 471 aa5.62□□□□□ -1.51
PSEN1-216ENST00000556066 SRP9P49458 86 aaKnown RBP5.62□□□□□ -1.51
PSEN1-216ENST00000556066 RGS6P49758 472 aa5.62□□□□□ -1.51
PSEN1-216ENST00000556066 ZNF154Q13106 437 aa5.62□□□□□ -1.51
PSEN1-216ENST00000556066 ODF1Q14990 250 aa5.62□□□□□ -1.51
PSEN1-216ENST00000556066 KCNMB1Q16558 191 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms