RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 Q1RN00 199 aa2.54□□□□□ -2
SRP54-209ENST00000555746 LRRC36Q1X8D7 754 aa2.54□□□□□ -2
SRP54-209ENST00000555746 MICAQ29983 383 aa2.54□□□□□ -2
SRP54-209ENST00000555746 CNPY1Q3B7I2 92 aa2.54□□□□□ -2
SRP54-209ENST00000555746 SBK1Q52WX2 424 aa2.54□□□□□ -2
SRP54-209ENST00000555746 KLHL12Q53G59 568 aa2.54□□□□□ -2
SRP54-209ENST00000555746 H3F3CQ6NXT2 135 aa2.54□□□□□ -2
SRP54-209ENST00000555746 NIPAL3Q6P499 406 aa2.54□□□□□ -2
SRP54-209ENST00000555746 CERS6Q6ZMG9 384 aa2.54□□□□□ -2
SRP54-209ENST00000555746 Q6ZS52 159 aa2.54□□□□□ -2
SRP54-209ENST00000555746 NIPA1Q7RTP0 329 aa2.54□□□□□ -2
SRP54-209ENST00000555746 NET1Q7Z628 596 aaPredicted RBP2.54□□□□□ -2
SRP54-209ENST00000555746 ZNF546Q86UE3 836 aa2.54□□□□□ -2
SRP54-209ENST00000555746 CRLF3Q8IUI8 442 aa2.54□□□□□ -2
SRP54-209ENST00000555746 FUNDC1Q8IVP5 155 aa2.54□□□□□ -2
SRP54-209ENST00000555746 FBXO16Q8IX29 292 aaPredicted RBP2.54□□□□□ -2
SRP54-209ENST00000555746 PRSS58Q8IYP2 241 aa2.54□□□□□ -2
SRP54-209ENST00000555746 ZFP82Q8N141 532 aa2.54□□□□□ -2
SRP54-209ENST00000555746 CYP4Z2PQ8N1L4 340 aa2.54□□□□□ -2
SRP54-209ENST00000555746 STK40Q8N2I9 435 aa2.54□□□□□ -2
SRP54-209ENST00000555746 FBXL16Q8N461 479 aa2.54□□□□□ -2
SRP54-209ENST00000555746 OR2L5Q8NG80 312 aa2.54□□□□□ -2
SRP54-209ENST00000555746 OR5B17Q8NGF7 314 aa2.54□□□□□ -2
SRP54-209ENST00000555746 OR2L8Q8NGY9 312 aa2.54□□□□□ -2
SRP54-209ENST00000555746 TYMSOSQ8TAI1 123 aa2.54□□□□□ -2
SRP54-209ENST00000555746 ACTL9Q8TC94 416 aa2.54□□□□□ -2
SRP54-209ENST00000555746 TCP10LQ8TDR4 215 aa2.54□□□□□ -2
SRP54-209ENST00000555746 NEK7Q8TDX7 302 aa2.54□□□□□ -2
SRP54-209ENST00000555746 RNF133Q8WVZ7 376 aa2.54□□□□□ -2
SRP54-209ENST00000555746 C22orf15Q8WYQ4 148 aa2.54□□□□□ -2
SRP54-209ENST00000555746 PINX1Q96BK5 328 aaKnown RBP2.54□□□□□ -2
SRP54-209ENST00000555746 TM4SF19Q96DZ7 209 aa2.54□□□□□ -2
SRP54-209ENST00000555746 SMIM10Q96HG1 83 aa2.54□□□□□ -2
SRP54-209ENST00000555746 AKR1E2Q96JD6 320 aa2.54□□□□□ -2
SRP54-209ENST00000555746 MBOAT7Q96N66 472 aa2.54□□□□□ -2
SRP54-209ENST00000555746 TEAD3Q99594 435 aa2.54□□□□□ -2
SRP54-209ENST00000555746 EBNA1BP2Q99848 306 aaKnown RBP2.54□□□□□ -2
SRP54-209ENST00000555746 SLC30A2Q9BRI3 323 aa2.54□□□□□ -2
SRP54-209ENST00000555746 YIPF3Q9GZM5 350 aa2.54□□□□□ -2
SRP54-209ENST00000555746 ALX4Q9H161 411 aaPredicted RBP2.54□□□□□ -2
SRP54-209ENST00000555746 TRABDQ9H4I3 376 aa2.54□□□□□ -2
SRP54-209ENST00000555746 ASB7Q9H672 318 aa2.54□□□□□ -2
SRP54-209ENST00000555746 CWH43Q9H720 699 aa2.54□□□□□ -2
SRP54-209ENST00000555746 CALHM2Q9HA72 323 aa2.54□□□□□ -2
SRP54-209ENST00000555746 ZC4H2Q9NQZ6 224 aa2.54□□□□□ -2
SRP54-209ENST00000555746 CTPS2Q9NRF8 586 aa2.54□□□□□ -2
SRP54-209ENST00000555746 TAS2R1Q9NYW7 299 aa2.54□□□□□ -2
SRP54-209ENST00000555746 MRM2Q9UI43 246 aaKnown RBP2.54□□□□□ -2
SRP54-209ENST00000555746 PHF11Q9UIL8 331 aa2.54□□□□□ -2
SRP54-209ENST00000555746 NUP50Q9UKX7 468 aa2.54□□□□□ -2
SRP54-209ENST00000555746 FOXJ3Q9UPW0 622 aa2.54□□□□□ -2
SRP54-209ENST00000555746 RNF115Q9Y4L5 304 aa2.54□□□□□ -2
SRP54-209ENST00000555746 GMPPBQ9Y5P6 360 aa2.54□□□□□ -2
SRP54-209ENST00000555746 KPTNQ9Y664 436 aa2.54□□□□□ -2
SRP54-209ENST00000555746 SMAD5-AS1Q9Y6J3 95 aa2.54□□□□□ -2
SRP54-209ENST00000555746 MYO18AQ92614 2054 aaKnown RBP2.54□□□□□ -2
SRP54-209ENST00000555746 TACC2O95359 2948 aa2.53□□□□□ -2
SRP54-209ENST00000555746 CHD5Q8TDI0 1954 aa2.53□□□□□ -2
SRP54-209ENST00000555746 PPIAL4EA0A075B759 164 aa2.53□□□□□ -2
SRP54-209ENST00000555746 TRBV7-9A0A0J9YWB2 115 aa2.53□□□□□ -2
SRP54-209ENST00000555746 TRBV11-1A0A0K0K1C0 115 aa2.53□□□□□ -2
SRP54-209ENST00000555746 A0A1B0GVL5 298 aa2.53□□□□□ -2
SRP54-209ENST00000555746 A0A1W2PQL4 384 aaPredicted RBP2.53□□□□□ -2
SRP54-209ENST00000555746 SLC5A10A0PJK1 596 aa2.53□□□□□ -2
SRP54-209ENST00000555746 RNF222A6NCQ9 220 aa2.53□□□□□ -2
SRP54-209ENST00000555746 A6NIZ1 184 aa2.53□□□□□ -2
SRP54-209ENST00000555746 F8W036 122 aa2.53□□□□□ -2
SRP54-209ENST00000555746 H3BN98 237 aa2.53□□□□□ -2
SRP54-209ENST00000555746 H3BTX0 84 aa2.53□□□□□ -2
SRP54-209ENST00000555746 M0QZK8 103 aa2.53□□□□□ -2
SRP54-209ENST00000555746 SAP18O00422 153 aaKnown RBP2.53□□□□□ -2
SRP54-209ENST00000555746 GOSR2O14653 212 aa2.53□□□□□ -2
SRP54-209ENST00000555746 IMPA2O14732 288 aa2.53□□□□□ -2
SRP54-209ENST00000555746 RS1O15537 224 aa2.53□□□□□ -2
SRP54-209ENST00000555746 CST8O60676 142 aa2.53□□□□□ -2
SRP54-209ENST00000555746 TPST2O60704 377 aa2.53□□□□□ -2
SRP54-209ENST00000555746 CTNSO60931 367 aa2.53□□□□□ -2
SRP54-209ENST00000555746 SRP72O76094 671 aaKnown RBP2.53□□□□□ -2
SRP54-209ENST00000555746 OR2F2O95006 317 aa2.53□□□□□ -2
SRP54-209ENST00000555746 VAMP5O95183 116 aa2.53□□□□□ -2
SRP54-209ENST00000555746 IGKV5-2P06315 115 aa2.53□□□□□ -2
SRP54-209ENST00000555746 LINC00614P0C842 121 aa2.53□□□□□ -2
SRP54-209ENST00000555746 OCM2P0CE71 109 aa2.53□□□□□ -2
SRP54-209ENST00000555746 UBCP0CG48 685 aaKnown RBP2.53□□□□□ -2
SRP54-209ENST00000555746 PET100P0DJ07 73 aa2.53□□□□□ -2
SRP54-209ENST00000555746 PPIAL4FP0DN26 164 aa2.53□□□□□ -2
SRP54-209ENST00000555746 SLC2A1P11166 492 aa2.53□□□□□ -2
SRP54-209ENST00000555746 ICAM2P13598 275 aa2.53□□□□□ -2
SRP54-209ENST00000555746 UQCRC2P22695 453 aa2.53□□□□□ -2
SRP54-209ENST00000555746 ME2P23368 584 aa2.53□□□□□ -2
SRP54-209ENST00000555746 MMP11P24347 488 aa2.53□□□□□ -2
SRP54-209ENST00000555746 HLA-DMAP28067 261 aa2.53□□□□□ -2
SRP54-209ENST00000555746 UQCRFS1P47985 274 aa2.53□□□□□ -2
SRP54-209ENST00000555746 NPBWR2P48146 333 aa2.53□□□□□ -2
SRP54-209ENST00000555746 GSSP48637 474 aa2.53□□□□□ -2
SRP54-209ENST00000555746 MRPL19P49406 292 aaKnown RBP2.53□□□□□ -2
SRP54-209ENST00000555746 RAG2P55895 527 aa2.53□□□□□ -2
SRP54-209ENST00000555746 PPIAP62937 165 aaKnown RBP2.53□□□□□ -2
SRP54-209ENST00000555746 ERVK-25P63136 954 aa2.53□□□□□ -2
SRP54-209ENST00000555746 MRPS6P82932 125 aaKnown RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms