RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 SPATC1Q76KD6 591 aa11.55□□□□□ -0.56
PCNX4-209ENST00000555569 NLRC3Q7RTR2 1065 aa11.55□□□□□ -0.56
PCNX4-209ENST00000555569 ERI1Q8IV48 349 aaKnown RBP11.55□□□□□ -0.56
PCNX4-209ENST00000555569 OR56B2PQ8NGI1 322 aa11.55□□□□□ -0.56
PCNX4-209ENST00000555569 OR6N2Q8NGY6 317 aa11.55□□□□□ -0.56
PCNX4-209ENST00000555569 CANT1Q8WVQ1 401 aa11.55□□□□□ -0.56
PCNX4-209ENST00000555569 OTULINQ96BN8 352 aa11.55□□□□□ -0.56
PCNX4-209ENST00000555569 INTS14Q96SY0 518 aa11.55□□□□□ -0.56
PCNX4-209ENST00000555569 OPA3Q9H6K4 179 aa11.55□□□□□ -0.56
PCNX4-209ENST00000555569 FN3KRPQ9HA64 309 aa11.55□□□□□ -0.56
PCNX4-209ENST00000555569 NTN4Q9HB63 628 aa11.55□□□□□ -0.56
PCNX4-209ENST00000555569 MRPL15Q9P015 296 aaKnown RBP11.55□□□□□ -0.56
PCNX4-209ENST00000555569 GLCEO94923 617 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 PTBP3O95758 552 aaKnown RBP11.54□□□□□ -0.56
PCNX4-209ENST00000555569 PAICSP22234 425 aaKnown RBP11.54□□□□□ -0.56
PCNX4-209ENST00000555569 POU1F1P28069 291 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 GSTT1P30711 240 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 CD80P33681 288 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 PITPNBP48739 271 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 CX3CR1P49238 355 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 PAX2Q02962 417 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 BTNL3Q6UXE8 466 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 LRRN1Q6UXK5 716 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 DCDC5Q6ZRR9 648 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 TRPM8Q7Z2W7 1104 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 DPY19L4Q7Z388 723 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 TMEM179BQ7Z7N9 219 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 ZDHHC22Q8N966 263 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 SPERTQ8NA61 448 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 PLPP7Q8NBV4 271 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 C19orf18Q8NEA5 215 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 RAB40AQ8WXH6 277 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 TOR3AQ9H497 397 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 SP140LQ9H930 580 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 MARCH7Q9H992 704 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 ESM1Q9NQ30 184 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 PDP1Q9P0J1 537 aaPredicted RBP11.54□□□□□ -0.56
PCNX4-209ENST00000555569 RNF7Q9UBF6 113 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 ZNF69Q9UC07 566 aa11.54□□□□□ -0.56
PCNX4-209ENST00000555569 TENM1Q9UKZ4 2725 aa11.53□□□□□ -0.56
PCNX4-209ENST00000555569 IGHV2-70DA0A0C4DH43 119 aa11.53□□□□□ -0.56
PCNX4-209ENST00000555569 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.53□□□□□ -0.56
PCNX4-209ENST00000555569 TBX1O43435 398 aa11.53□□□□□ -0.56
PCNX4-209ENST00000555569 E2F6O75461 281 aa11.53□□□□□ -0.56
PCNX4-209ENST00000555569 ANXA2P07355 339 aaKnown RBP11.53□□□□□ -0.56
PCNX4-209ENST00000555569 HSD11B1P28845 292 aa11.53□□□□□ -0.56
PCNX4-209ENST00000555569 DDOSTP39656 456 aa11.53□□□□□ -0.56
PCNX4-209ENST00000555569 GINS1Q14691 196 aa11.53□□□□□ -0.56
PCNX4-209ENST00000555569 TUSC1Q2TAM9 212 aa11.53□□□□□ -0.56
PCNX4-209ENST00000555569 DNAL1Q4LDG9 190 aa11.53□□□□□ -0.56
PCNX4-209ENST00000555569 LYPD2Q6UXB3 125 aa11.53□□□□□ -0.56
PCNX4-209ENST00000555569 RBMS3Q6XE24 437 aaKnown RBP11.53□□□□□ -0.56
PCNX4-209ENST00000555569 SHFQ7M4L6 423 aa11.53□□□□□ -0.56
PCNX4-209ENST00000555569 SIGLECL1Q8N7X8 197 aa11.53□□□□□ -0.56
PCNX4-209ENST00000555569 RNF133Q8WVZ7 376 aa11.53□□□□□ -0.56
PCNX4-209ENST00000555569 GCDHQ92947 438 aaPredicted RBP11.53□□□□□ -0.56
PCNX4-209ENST00000555569 SPSB4Q96A44 273 aa11.53□□□□□ -0.56
PCNX4-209ENST00000555569 DACT3Q96B18 629 aaPredicted RBP11.53□□□□□ -0.56
PCNX4-209ENST00000555569 ABHD6Q9BV23 337 aa11.53□□□□□ -0.56
PCNX4-209ENST00000555569 OR51V1Q9H2C8 321 aa11.53□□□□□ -0.56
PCNX4-209ENST00000555569 CLN8Q9UBY8 286 aa11.53□□□□□ -0.56
PCNX4-209ENST00000555569 NBEAL1Q6ZS30 2694 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 TMEM89A2RUT3 159 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 PRR23D1E9PI22 279 aaPredicted RBP11.52□□□□□ -0.57
PCNX4-209ENST00000555569 LGALS8O00214 317 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 PHYHO14832 338 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 GYG2O15488 501 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 APOC1P02654 83 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 PRR23D2P0DMB1 279 aaPredicted RBP11.52□□□□□ -0.57
PCNX4-209ENST00000555569 PPIAL4GP0DN37 164 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 OSMP13725 252 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 COMPP49747 757 aaPredicted RBP11.52□□□□□ -0.57
PCNX4-209ENST00000555569 UBA52P62987 128 aaKnown RBP11.52□□□□□ -0.57
PCNX4-209ENST00000555569 MZT1Q08AG7 82 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 FLOT2Q14254 428 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 KCNJ8Q15842 424 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 TIGD6Q17RP2 521 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 WDR25Q64LD2 544 aaPredicted RBP11.52□□□□□ -0.57
PCNX4-209ENST00000555569 SLC16A9Q7RTY1 509 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 SPATA24Q86W54 205 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 TIGD4Q8IY51 512 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 HS3ST5Q8IZT8 346 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 BCL6BQ8N143 479 aaPredicted RBP11.52□□□□□ -0.57
PCNX4-209ENST00000555569 BOLLQ8N9W6 283 aaKnown RBP11.52□□□□□ -0.57
PCNX4-209ENST00000555569 BCAS4Q8TDM0 211 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 ZMYND19Q96E35 227 aaPredicted RBP11.52□□□□□ -0.57
PCNX4-209ENST00000555569 REEP6Q96HR9 211 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 AMELYQ99218 206 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 NUDT16L1Q9BRJ7 211 aaKnown RBP11.52□□□□□ -0.57
PCNX4-209ENST00000555569 KRTAP3-3Q9BYR6 98 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 KRTAP3-2Q9BYR7 98 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 YY1AP1Q9H869 796 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 ZNF556Q9HAH1 456 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 C14orf119Q9NWQ9 140 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 C1orf123Q9NWV4 160 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 DNAJC27Q9NZQ0 273 aa11.52□□□□□ -0.57
PCNX4-209ENST00000555569 KIR2DS1A0A191URI9 304 aa11.51□□□□□ -0.57
PCNX4-209ENST00000555569 A6NLC8 198 aa11.51□□□□□ -0.57
PCNX4-209ENST00000555569 ANKRD30BLA7E2S9 258 aa11.51□□□□□ -0.57
PCNX4-209ENST00000555569 HMGN1P05114 100 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms