RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 LINC01356Q8N9X3 169 aa10.25□□□□□ -0.77
SRP54-206ENST00000555317 CLDND2Q8NHS1 167 aa10.25□□□□□ -0.77
SRP54-206ENST00000555317 MSI2Q96DH6 328 aaKnown RBP10.25□□□□□ -0.77
SRP54-206ENST00000555317 MEGF10Q96KG7 1140 aa10.25□□□□□ -0.77
SRP54-206ENST00000555317 GAL3ST1Q99999 423 aa10.25□□□□□ -0.77
SRP54-206ENST00000555317 ADAT1Q9BUB4 502 aaKnown RBP10.25□□□□□ -0.77
SRP54-206ENST00000555317 REPIN1Q9BWE0 567 aaKnown RBP10.25□□□□□ -0.77
SRP54-206ENST00000555317 RGCCQ9H4X1 137 aa10.25□□□□□ -0.77
SRP54-206ENST00000555317 TMEM106BQ9NUM4 274 aa10.25□□□□□ -0.77
SRP54-206ENST00000555317 MRPL15Q9P015 296 aaKnown RBP10.25□□□□□ -0.77
SRP54-206ENST00000555317 KLHDC2Q9Y2U9 406 aa10.25□□□□□ -0.77
SRP54-206ENST00000555317 WIPI2Q9Y4P8 454 aa10.25□□□□□ -0.77
SRP54-206ENST00000555317 LRP12Q9Y561 859 aa10.25□□□□□ -0.77
SRP54-206ENST00000555317 SNTNA6NMZ2 147 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 B4DSR2 109 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 F5H5P2 479 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 GMDSO60547 372 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 LMX1BO60663 402 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 HLA-DPB1P04440 258 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 HNF1AP20823 631 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 PCMT1P22061 227 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 CA6P23280 308 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 HTR1FP30939 366 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 IL2RGP31785 369 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 GNALP38405 381 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 DDOSTP39656 456 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 RIDAP52758 137 aaKnown RBP10.24□□□□□ -0.77
SRP54-206ENST00000555317 HCCSP53701 268 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 AADACL4Q5VUY2 407 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 DEGS2Q6QHC5 323 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 C1orf87Q8N0U7 546 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 OR56B2PQ8NGI1 322 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 OR51G2Q8NGK0 314 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 OR11L1Q8NGX0 322 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 OR8S1Q8NH09 359 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 TRUB1Q8WWH5 349 aaKnown RBP10.24□□□□□ -0.77
SRP54-206ENST00000555317 TTTY10Q9BZA0 68 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 CLN6Q9NWW5 311 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 UBAP1Q9NZ09 502 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 ZNF391Q9UJN7 358 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 PCDHB10Q9UN67 800 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 GTF2A1LQ9UNN4 478 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 GMPPBQ9Y5P6 360 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 NPTNQ9Y639 398 aa10.24□□□□□ -0.77
SRP54-206ENST00000555317 IGHV3-64DA0A0J9YX35 117 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 TMEM269A0A1B0GVZ9 245 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 H0YL77 283 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 PSMD9O00233 223 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 MLNRO43193 412 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 ZNF254O75437 659 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 ANPEPP15144 967 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 MMP16P51512 607 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 CXCR4P61073 352 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 GABPB1Q06547 395 aaPredicted RBP10.23□□□□□ -0.77
SRP54-206ENST00000555317 TMED1Q13445 227 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 CHRFAM7AQ494W8 412 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 ZNF322Q6U7Q0 402 aaPredicted RBP10.23□□□□□ -0.77
SRP54-206ENST00000555317 ZNF771Q7L3S4 317 aaPredicted RBP10.23□□□□□ -0.77
SRP54-206ENST00000555317 MOGAT3Q86VF5 341 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 GLCCI1Q86VQ1 547 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 KLBQ86Z14 1044 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 ZNF679Q8IYX0 411 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 SPICQ8N5J4 248 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 CELF2-AS1Q8N7Q2 184 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 SPERTQ8NA61 448 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 CSNK2A3Q8NEV1 391 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 OR10H4Q8NGA5 316 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 OR51F2Q8NH61 342 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 SPSB4Q96A44 273 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 HRASLS5Q96KN8 279 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 OR8B4Q96RC9 309 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 PAPOLGQ9BWT3 736 aaKnown RBP10.23□□□□□ -0.77
SRP54-206ENST00000555317 BEX2Q9BXY8 128 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 SHARPINQ9H0F6 387 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 ZNF665Q9H7R5 613 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 FN3KRPQ9HA64 309 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 ADGRL4Q9HBW9 690 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 GCM1Q9NP62 436 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 C14orf119Q9NWQ9 140 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 HAO2Q9NYQ3 351 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 LPAR3Q9UBY5 353 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 CDC42EP3Q9UKI2 254 aa10.23□□□□□ -0.77
SRP54-206ENST00000555317 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.23□□□□□ -0.77
SRP54-206ENST00000555317 C5orf63A6NC05 138 aa10.22□□□□□ -0.77
SRP54-206ENST00000555317 ACOD1A6NK06 481 aa10.22□□□□□ -0.77
SRP54-206ENST00000555317 WNT9BO14905 357 aa10.22□□□□□ -0.77
SRP54-206ENST00000555317 CRLF1O75462 422 aa10.22□□□□□ -0.77
SRP54-206ENST00000555317 KRT8P05787 483 aa10.22□□□□□ -0.77
SRP54-206ENST00000555317 SBK2P0C263 348 aa10.22□□□□□ -0.77
SRP54-206ENST00000555317 CD200P41217 278 aa10.22□□□□□ -0.77
SRP54-206ENST00000555317 GSK3AP49840 483 aa10.22□□□□□ -0.77
SRP54-206ENST00000555317 BTG1P62324 171 aa10.22□□□□□ -0.77
SRP54-206ENST00000555317 EFNB1P98172 346 aa10.22□□□□□ -0.77
SRP54-206ENST00000555317 ROM1Q03395 351 aa10.22□□□□□ -0.77
SRP54-206ENST00000555317 SPRNQ5BIV9 151 aa10.22□□□□□ -0.77
SRP54-206ENST00000555317 MEDAGQ5VYS4 303 aa10.22□□□□□ -0.77
SRP54-206ENST00000555317 MUC20Q8N307 709 aaPredicted RBP10.22□□□□□ -0.77
SRP54-206ENST00000555317 KLHL36Q8N4N3 616 aa10.22□□□□□ -0.77
SRP54-206ENST00000555317 ZNF555Q8NEP9 628 aa10.22□□□□□ -0.77
SRP54-206ENST00000555317 ERGIC1Q969X5 290 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms