RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 CRNNQ9UBG3 495 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-231ENST00000554994 BAIAP2Q9UQB8 552 aa3.98□□□□□ -1.77
ATXN3-231ENST00000554994 PCDHGB1Q9Y5G3 927 aa3.98□□□□□ -1.77
ATXN3-231ENST00000554994 LOC100509620A0A075B734 347 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 NPIPB13A6NJU9 1138 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 NPIPB4C9JG80 1138 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 M0R233 179 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 BHLHE40O14503 412 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 ARPC3O15145 178 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 SPRY3O43610 288 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 SYNGR3O43761 229 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 MGRN1O60291 552 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 LMX1BO60663 402 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 TXNDC12O95881 172 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 NGFP01138 241 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 IGHV4-39P01824 125 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 TFP02787 698 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 MT-ND5P03915 603 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 MRPL3P09001 348 aaKnown RBP3.97□□□□□ -1.77
ATXN3-231ENST00000554994 MMP7P09237 267 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-231ENST00000554994 APEHP13798 732 aaKnown RBP3.97□□□□□ -1.77
ATXN3-231ENST00000554994 DAOP14920 347 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 HSD11B1P28845 292 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 GRK5P34947 590 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 ATP6V1E1P36543 226 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 PDLIM4P50479 330 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 PRKXP51817 358 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 EFNA4P52798 201 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 HCCSP53701 268 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 TPTEP56180 551 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 KLF3P57682 345 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-231ENST00000554994 LSM6P62312 80 aaKnown RBP3.97□□□□□ -1.77
ATXN3-231ENST00000554994 CCL8P80075 99 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 AQP6Q13520 282 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 RIPK1Q13546 671 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 APOFQ13790 326 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 GGTLC2Q14390 218 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 GK3PQ14409 553 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 HLXQ14774 488 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-231ENST00000554994 PTGES3Q15185 160 aaKnown RBP3.97□□□□□ -1.77
ATXN3-231ENST00000554994 ATP6AP1Q15904 470 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 MOGQ16653 247 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 MST1LQ2TV78 715 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 GFOD2Q3B7J2 385 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 CCDC92Q53HC0 331 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-231ENST00000554994 ELFN2Q5R3F8 820 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 ASRGL1Q7L266 308 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 DCXRQ7Z4W1 244 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 NAA40Q86UY6 237 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 ZNF584Q8IVC4 421 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 OR5AS1Q8N127 324 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 LNX2Q8N448 690 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 GALNT4Q8N4A0 578 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 ZNF525Q8N782 197 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 ZNF283Q8N7M2 679 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 TCEANCQ8N8B7 351 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 PAPD5Q8NDF8 572 aaKnown RBP3.97□□□□□ -1.77
ATXN3-231ENST00000554994 OR5L1Q8NGL2 311 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 OR6N2Q8NGY6 317 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 ZNRF4Q8WWF5 429 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 SPTSSAQ969W0 71 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 MRPL24Q96A35 216 aaKnown RBP3.97□□□□□ -1.77
ATXN3-231ENST00000554994 NMD3Q96D46 503 aaKnown RBP3.97□□□□□ -1.77
ATXN3-231ENST00000554994 NRBF2Q96F24 287 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 CENPNQ96H22 339 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-231ENST00000554994 BOD1Q96IK1 185 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 POM121L2Q96KW2 1035 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 IL4I1Q96RQ9 567 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 GPX7Q96SL4 187 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-231ENST00000554994 DOK1Q99704 481 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 CIB1Q99828 191 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 MRPL37Q9BZE1 423 aaKnown RBP3.97□□□□□ -1.77
ATXN3-231ENST00000554994 BCL2L14Q9BZR8 327 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 OR2J1Q9GZK6 312 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 MS4A5Q9H3V2 200 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 NARFLQ9H6Q4 476 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 WDR76Q9H967 626 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 NTN4Q9HB63 628 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 ZNF701Q9NV72 531 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-231ENST00000554994 TMEM160Q9NX00 188 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 DNAJC27Q9NZQ0 273 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 NDRG4Q9ULP0 352 aaKnown RBP3.97□□□□□ -1.77
ATXN3-231ENST00000554994 GTF2A1LQ9UNN4 478 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 STARD10Q9Y365 291 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 FKBP7Q9Y680 259 aa3.97□□□□□ -1.77
ATXN3-231ENST00000554994 HYDINQ4G0P3 5121 aa3.96□□□□□ -1.78
ATXN3-231ENST00000554994 IGHV4-30-2A0A087WSY4 118 aa3.96□□□□□ -1.78
ATXN3-231ENST00000554994 IGLV1-36A0A0B4J1U3 117 aa3.96□□□□□ -1.78
ATXN3-231ENST00000554994 IGHV3-64DA0A0J9YX35 117 aa3.96□□□□□ -1.78
ATXN3-231ENST00000554994 TMEM129A0AVI4 362 aa3.96□□□□□ -1.78
ATXN3-231ENST00000554994 OR6C6A6NF89 314 aa3.96□□□□□ -1.78
ATXN3-231ENST00000554994 GGT3PA6NGU5 568 aa3.96□□□□□ -1.78
ATXN3-231ENST00000554994 M0R129 80 aa3.96□□□□□ -1.78
ATXN3-231ENST00000554994 PSMD9O00233 223 aa3.96□□□□□ -1.78
ATXN3-231ENST00000554994 PPIHO43447 177 aaKnown RBP3.96□□□□□ -1.78
ATXN3-231ENST00000554994 SELENOFO60613 162 aa3.96□□□□□ -1.78
ATXN3-231ENST00000554994 GLCEO94923 617 aa3.96□□□□□ -1.78
ATXN3-231ENST00000554994 ANXA2P07355 339 aaKnown RBP3.96□□□□□ -1.78
ATXN3-231ENST00000554994 H2BFMP0C1H6 154 aa3.96□□□□□ -1.78
ATXN3-231ENST00000554994 SPI1P17947 270 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms