RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 GDNFP39905 211 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 FOXF1Q12946 379 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 KLF9Q13886 244 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-216ENST00000554975 EIF2B1Q14232 305 aaKnown RBP9.77□□□□□ -0.85
SHMT2-216ENST00000554975 MEP1BQ16820 701 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 ACSF3Q4G176 576 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-216ENST00000554975 HES5Q5TA89 166 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 TMEM244Q5VVB8 128 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 GLT8D1Q68CQ7 371 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 TMEM53Q6P2H8 277 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 LYPD4Q6UWN0 246 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 PRSS57Q6UWY2 283 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 CMTM4Q8IZR5 234 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 OR1J4Q8NGS1 313 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 ZFAND1Q8TCF1 268 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 DUSP19Q8WTR2 217 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 SMAP2Q8WU79 429 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-216ENST00000554975 ZNRF4Q8WWF5 429 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 FCAMRQ8WWV6 532 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 SLC25A38Q96DW6 304 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 HYLS1Q96M11 299 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 TSSK2Q96PF2 358 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 ABHD1Q96SE0 405 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 CACNG6Q9BXT2 260 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 ANGPTL4Q9BY76 406 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 RANGRFQ9HD47 186 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-216ENST00000554975 DIABLOQ9NR28 239 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 NUDT15Q9NV35 164 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 MCUBQ9NWR8 336 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 FRRS1LQ9P0K9 344 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 FOXD3Q9UJU5 478 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-216ENST00000554975 HHLA2Q9UM44 414 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 RBMX2Q9Y388 322 aaKnown RBP9.77□□□□□ -0.85
SHMT2-216ENST00000554975 R4GMQ9 66 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 EEF1E1-BLOC1S5C9J1V9 151 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 DCTN6O00399 190 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 ZNF593O00488 134 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-216ENST00000554975 SLC17A2O00624 439 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 PEX14O75381 377 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 CNOT4O95628 575 aaKnown RBP9.76□□□□□ -0.85
SHMT2-216ENST00000554975 PLGP00747 810 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-216ENST00000554975 CSF1P09603 554 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 H2AFB2P0C5Z0 115 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 TFPIP10646 304 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 C4BPBP20851 252 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 GZMKP49863 264 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 ACTBP60709 375 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 ACTG1P63261 375 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 DGCR2P98153 550 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 SORDQ00796 357 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 CD83Q01151 205 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 SNTB2Q13425 540 aaKnown RBP9.76□□□□□ -0.85
SHMT2-216ENST00000554975 MADCAM1Q13477 382 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 RAB11BQ15907 218 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 WDR38Q5JTN6 314 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 KLHL24Q6TFL4 600 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 SLC35D2Q76EJ3 337 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 LRRTM1Q86UE6 522 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 NOXO1Q8NFA2 376 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 SLC26A10Q8NG04 563 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 OR4K17Q8NGC6 315 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 OR6M1Q8NGM8 313 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 SYNPRQ8TBG9 265 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 MCHR2Q969V1 340 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 ZBTB8AQ96BR9 441 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 FOXRED1Q96CU9 486 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-216ENST00000554975 LRRC46Q96FV0 321 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 ZFP3Q96NJ6 502 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 GNRHR2Q96P88 292 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 RBP7Q96R05 134 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 RTN4RQ9BZR6 473 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 RANBP3Q9H6Z4 567 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-216ENST00000554975 ELOVL3Q9HB03 270 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 GPN1Q9HCN4 374 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-216ENST00000554975 GALNT9Q9HCQ5 603 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 JKAMPQ9P055 326 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 ZNF629Q9UEG4 869 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-216ENST00000554975 ING4Q9UNL4 249 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 MRPS7Q9Y2R9 242 aaKnown RBP9.76□□□□□ -0.85
SHMT2-216ENST00000554975 HDGFL3Q9Y3E1 203 aa9.76□□□□□ -0.85
SHMT2-216ENST00000554975 LOC100289279A0A1B0GTE1 492 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 A0A1W2PPK0 400 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 LIPT2A6NK58 231 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 PRR32B1ATL7 298 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 SULT1C2O00338 296 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 MAGEB4O15481 346 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-216ENST00000554975 GMFGO60234 142 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 GOSR1O95249 250 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 IGHG1P01857 330 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 ISG15P05161 165 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 CD3GP09693 182 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 CTLA4P16410 223 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 BTCP35070 178 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 KIR3DL2P43630 455 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 SOX2P48431 317 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 TAS2R20P59543 309 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 POU3F1Q03052 451 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-216ENST00000554975 FAPQ12884 760 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 TNK1Q13470 666 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 OR7A5Q15622 319 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms