RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	OR5B2	Q96R09	309 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	TNFRSF13C	Q96RJ3	184 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	URM1	Q9BTM9	101 aa	Known RBP	4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	OR11A1	Q9GZK7	315 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	CTPS2	Q9NRF8	586 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	HEATR5A	Q86XA9	2040 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	FREM1	Q5H8C1	2179 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	NOTCH3	Q9UM47	2321 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	SVEP1	Q4LDE5	3571 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	NBEAL1	Q6ZS30	2694 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	GJE1	A6NN92	205 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	KRTAP16-1	A8MUX0	517 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	PRSS46	E5RG02	174 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956		M0R1B8	84 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	KIF2A	O00139	706 aa	Predicted RBP	4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	COPE	O14579	308 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	ZNF264	O43296	627 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	LYPLA1	O75608	230 aa	Predicted RBP	4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	DFFB	O76075	338 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	OR12D1	P0DN82	309 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	NEFH	P12036	1026 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	GGT1	P19440	569 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	ATP6V1C1	P21283	382 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	IGFBP5	P24593	272 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	OR3A1	P47881	315 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	OR3A3	P47888	321 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	H3F3A	P84243	136 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	VLDLR	P98155	873 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	LOXL1	Q08397	574 aa	Predicted RBP	4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	MERTK	Q12866	999 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	SQLE	Q14534	574 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	CHRFAM7A	Q494W8	412 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	ATP6AP1L	Q52LC2	224 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	TSPO2	Q5TGU0	170 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	FBXW9	Q5XUX1	488 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	AP1AR	Q63HQ0	302 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	OR4F3	Q6IEY1	312 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	EMB	Q6PCB8	327 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	WDR88	Q6ZMY6	472 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	C6orf120	Q7Z4R8	191 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	RTN4RL2	Q86UN3	420 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	MYPOP	Q86VE0	399 aa	Predicted RBP	4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	IFT20	Q8IY31	132 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	ZNF100	Q8IYN0	542 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	CDK20	Q8IZL9	346 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	SLC43A2	Q8N370	569 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	PRSS35	Q8N3Z0	413 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	ZIC4	Q8N9L1	334 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	CCDC63	Q8NA47	563 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	FAM71C	Q8NEG0	241 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	MNS1	Q8NEH6	495 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	MRGPRD	Q8TDS7	321 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	POM121L2	Q96KW2	1035 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	NSMCE2	Q96MF7	247 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	DHRS9	Q9BPW9	319 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	RSPO3	Q9BXY4	272 aa	Predicted RBP	4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	C20orf27	Q9GZN8	174 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	NMUR2	Q9GZQ4	415 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	HOXD1	Q9GZZ0	328 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	NGB	Q9NPG2	151 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	TIGAR	Q9NQ88	270 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	SLC7A10	Q9NS82	523 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	CBLN4	Q9NTU7	201 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	ACER3	Q9NUN7	267 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	UBQLN2	Q9UHD9	624 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	RABL2B	Q9UNT1	228 aa		4.25	□□□□□ -1.73
PSMC6-208	ENST00000554956	CR1	P17927	2039 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	MXRA5	Q9NR99	2828 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	TMEM72	A0PK05	275 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	CCT8L1P	A6NM43	557 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	ATP6V1G2-DDX39B	F2Z307	99 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956		H3BNH8	94 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956		H3BQF6	201 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956		H7C417	338 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	SULT2B1	O00204	365 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	KLF11	O14901	512 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	CFLAR	O15519	480 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	KIAA0513	O60268	411 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	EIF4E2	O60573	245 aa	Known RBP	4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	SPAG7	O75391	227 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	AKR7A3	O95154	331 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	CSTA	P01040	98 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	IGFBP1	P08833	259 aa	Predicted RBP	4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	PRPS1L1	P21108	318 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	HPCAL1	P37235	193 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	ACAA2	P42765	397 aa	Known RBP	4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	ASMT	P46597	345 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	FABP6	P51161	128 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	P2RY4	P51582	365 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	NAA20	P61599	178 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	PDK3	Q15120	406 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	ARHGAP11B	Q3KRB8	267 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	AGAP6	Q5VW22	663 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	C3orf33	Q6P1S2	294 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	FRRS1	Q6ZNA5	592 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	CROCCP3	Q8IVE0	287 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	UBE2J2	Q8N2K1	259 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	MUC15	Q8N387	334 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	ANKFN1	Q8N957	763 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms