RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 NME2P1O60361 137 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 UPK3AO75631 287 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 JTBO76095 146 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 GAPDHP04406 335 aaKnown RBP13.99□□□□□ -0.17
SYNE3-203ENST00000554873 NPSP0C0P6 89 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 OR13C7P0DN81 318 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 GRPRP30550 384 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 RPS21P63220 83 aaKnown RBP13.99□□□□□ -0.17
SYNE3-203ENST00000554873 PRICKLE4Q2TBC4 344 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 DCAF10Q5QP82 559 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 ZNF595Q8IYB9 648 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 FLVCR1-AS1Q8TAF5 88 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 SLC41A2Q96JW4 573 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 ASCL3Q9NQ33 180 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 HEBP2Q9Y5Z4 205 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 HS3ST3B1Q9Y662 390 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 A0A087WWC5 75 aa13.98□□□□□ -0.17
SYNE3-203ENST00000554873 CD37P11049 281 aa13.98□□□□□ -0.17
SYNE3-203ENST00000554873 GJA4P35212 333 aa13.98□□□□□ -0.17
SYNE3-203ENST00000554873 TAS2R31P59538 309 aa13.98□□□□□ -0.17
SYNE3-203ENST00000554873 MRPS11P82912 194 aaKnown RBP13.98□□□□□ -0.17
SYNE3-203ENST00000554873 ALG10BQ5I7T1 473 aa13.98□□□□□ -0.17
SYNE3-203ENST00000554873 SOHLH1Q5JUK2 328 aa13.98□□□□□ -0.17
SYNE3-203ENST00000554873 NAXEQ8NCW5 288 aa13.98□□□□□ -0.17
SYNE3-203ENST00000554873 OR14K1Q8NGZ2 314 aa13.98□□□□□ -0.17
SYNE3-203ENST00000554873 RAB18Q9NP72 206 aa13.98□□□□□ -0.17
SYNE3-203ENST00000554873 ZNF727A8MUV8 499 aa13.98□□□□□ -0.17
SYNE3-203ENST00000554873 IL18BPO95998 194 aa13.98□□□□□ -0.17
SYNE3-203ENST00000554873 ZNF616Q08AN1 781 aa13.98□□□□□ -0.17
SYNE3-203ENST00000554873 ZNF343Q6P1L6 599 aa13.98□□□□□ -0.17
SYNE3-203ENST00000554873 OR14C36Q8NHC7 312 aa13.98□□□□□ -0.17
SYNE3-203ENST00000554873 LMF1Q96S06 567 aa13.98□□□□□ -0.17
SYNE3-203ENST00000554873 PARP12Q9H0J9 701 aaKnown RBP13.98□□□□□ -0.17
SYNE3-203ENST00000554873 NELFAQ9H3P2 528 aa13.98□□□□□ -0.17
SYNE3-203ENST00000554873 MRPS18CQ9Y3D5 142 aaKnown RBP13.98□□□□□ -0.17
SYNE3-203ENST00000554873 A0A1B0GVT2 93 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 CYB5BO43169 146 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 RAMP1O60894 148 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 GPR75O95800 540 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 APLNRP35414 380 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 FCRL6Q6DN72 434 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 OR51F2Q8NH61 342 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 MCHR2Q969V1 340 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 NMNAT3Q96T66 252 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 COMMD4Q9H0A8 199 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 TCEAL2Q9H3H9 227 aaPredicted RBP13.97□□□□□ -0.17
SYNE3-203ENST00000554873 FBXO7Q9Y3I1 522 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 SLC31A1O15431 190 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 NDUFB2O95178 105 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 FBXO45P0C2W1 286 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 MED25Q71SY5 747 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 JAGN1Q8N5M9 183 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 ZNF676Q8N7Q3 588 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 SEMA6DQ8NFY4 1073 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 POC1BQ8TC44 478 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 ZPLD1Q8TCW7 415 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 ABHD5Q8WTS1 349 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 JSRP1Q96MG2 331 aaPredicted RBP13.97□□□□□ -0.17
SYNE3-203ENST00000554873 DNAJB12Q9NXW2 375 aaKnown RBP13.97□□□□□ -0.17
SYNE3-203ENST00000554873 PILRAQ9UKJ1 303 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 ENTPD2Q9Y5L3 495 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 SPTBP11277 2137 aa13.97□□□□□ -0.17
SYNE3-203ENST00000554873 CYR61O00622 381 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 TXNDC12O95881 172 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 ADH1BP00325 375 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 THBS4P35443 961 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 PMPCAQ10713 525 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 RAB32Q13637 225 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 PHF19Q5T6S3 580 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 FAM166AQ6J272 317 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 LINC00114Q6XXX2 140 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 SUMF2Q8NBJ7 301 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 NPEPL1Q8NDH3 523 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 OR10AC1Q8NH08 325 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 CCL4L1Q8NHW4 92 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 FAM174AQ8TBP5 190 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 FRZBQ92765 325 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 OR2M4Q96R27 311 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 MRM2Q9UI43 246 aaKnown RBP13.96□□□□□ -0.17
SYNE3-203ENST00000554873 TGIF2-C20orf24A0A0A6YYL0 155 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 PRSS38A1L453 326 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 OR4C45A6NMZ5 311 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 TAGLN2P37802 199 aaKnown RBP13.96□□□□□ -0.17
SYNE3-203ENST00000554873 ERVFRD-1P60508 538 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 AARDQ4LEZ3 155 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 RPUSD3Q6P087 351 aaKnown RBP13.96□□□□□ -0.17
SYNE3-203ENST00000554873 FIGLAQ6QHK4 219 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 OPN5Q6U736 354 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 DGAT2L6Q6ZPD8 337 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 RD3Q7Z3Z2 195 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 OR4N2Q8NGD1 307 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 RNF128Q8TEB7 428 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 SLC25A36Q96CQ1 311 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 SCARF2Q96GP6 870 aaPredicted RBP13.96□□□□□ -0.17
SYNE3-203ENST00000554873 TRIM2Q9C040 744 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 ZMAT3Q9HA38 289 aaKnown RBP13.96□□□□□ -0.17
SYNE3-203ENST00000554873 LYRM4Q9HD34 91 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 LUZP4Q9P127 313 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 PITPNC1Q9UKF7 332 aa13.96□□□□□ -0.17
SYNE3-203ENST00000554873 A0A0A6YYH2 397 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms