RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 ZNF91Q05481 1191 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 PIN1Q13526 163 aaPredicted RBP7.54□□□□□ -1.2
TDP1-208ENST00000553989 KCNJ8Q15842 424 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 SSX1Q16384 188 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 PCGF3Q3KNV8 242 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 SLC36A2Q495M3 483 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 DCAF12L2Q5VW00 463 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 SLC35D2Q76EJ3 337 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 HIST3H2AQ7L7L0 130 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 ZNF627Q7L945 461 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 SLC16A14Q7RTX9 510 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 ZNF584Q8IVC4 421 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 SKA3Q8IX90 412 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 RNF113BQ8IZP6 322 aaKnown RBP7.54□□□□□ -1.2
TDP1-208ENST00000553989 OR52I1Q8NGK6 324 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 SGMS2Q8NHU3 365 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 FAM216AQ8WUB2 273 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 ACOT12Q8WYK0 555 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 C11orf40Q8WZ69 217 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 UFD1Q92890 307 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 HIST1H2ACQ93077 130 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 SLC25A46Q96AG3 418 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 ZNF75AQ96N20 296 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 ZNF582Q96NG8 517 aaPredicted RBP7.54□□□□□ -1.2
TDP1-208ENST00000553989 MCHR1Q99705 422 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 ARHGDIGQ99819 225 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 TMEM43Q9BTV4 400 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 RSRP1Q9BUV0 290 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 SUCNR1Q9BXA5 334 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 SLC22A4Q9H015 551 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 C1orf198Q9H425 327 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 SAP30LQ9HAJ7 183 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 SMURF1Q9HCE7 757 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 INIPQ9NRY2 104 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 TMEM38BQ9NVV0 291 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 SLCO1C1Q9NYB5 712 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 ADAM30Q9UKF2 790 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 IGHV1-69-2A0A0G2JMI3 117 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 TMEM89A2RUT3 159 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 FAM172BPA6NC97 362 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 FABP12A6NFH5 140 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 CPSF4LA6NMK7 179 aaKnown RBP7.53□□□□□ -1.2
TDP1-208ENST00000553989 CENPBD1B2RD01 187 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 MCIDASD6RGH6 385 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 RGS5O15539 181 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 DHHO43323 396 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 PLPP2O43688 288 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 TPST2O60704 377 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 RP2O75695 350 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 CDRT1O95170 752 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 CH25HO95992 272 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 IGHG1P01857 330 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 HLA-DPB1P04440 258 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 ADRA2CP18825 462 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 APLNRP35414 380 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 TGFBR1P36897 503 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 MTNR1AP48039 350 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 ZNF84P51523 738 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 TPTEP56180 551 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 TAS2R41P59536 307 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 LMO4P61968 165 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 PPP3R1P63098 170 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 BDH1Q02338 343 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 HSF2Q03933 536 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 TNP2Q05952 138 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 ASAH1Q13510 395 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 TRAM1Q15629 374 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 HFEQ30201 348 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 DDI2Q5TDH0 399 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 MZT2BQ6NZ67 158 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 ZNF730Q6ZMV8 503 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 NANOGNBQ7Z5D8 188 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 DPPA2Q7Z7J5 298 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 WDFY1Q8IWB7 410 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 PAQR4Q8N4S7 273 aaPredicted RBP7.53□□□□□ -1.2
TDP1-208ENST00000553989 OR1J2Q8NGS2 313 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 OR6X1Q8NH79 312 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 VANGL1Q8TAA9 524 aaPredicted RBP7.53□□□□□ -1.2
TDP1-208ENST00000553989 FGFBP3Q8TAT2 258 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 NANPQ8TBE9 248 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 TMEM54Q969K7 222 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 TSPAN32Q96QS1 320 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 SLC6A7Q99884 636 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 GAL3ST1Q99999 423 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 JAM3Q9BX67 310 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 BCL2L14Q9BZR8 327 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 KCNN2Q9H2S1 579 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 LIN7BQ9HAP6 207 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 NANSQ9NR45 359 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 SNTG1Q9NSN8 517 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 TXNL4BQ9NX01 149 aaKnown RBP7.53□□□□□ -1.2
TDP1-208ENST00000553989 DNAJC27Q9NZQ0 273 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 CLEC2DQ9UHP7 191 aa7.53□□□□□ -1.2
TDP1-208ENST00000553989 EXOGQ9Y2C4 368 aaKnown RBP7.53□□□□□ -1.2
TDP1-208ENST00000553989 TMEM238LA0A1B0GVL6 79 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 PLSCR5A0PG75 271 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 CENPXA8MT69 81 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 SPRY3O43610 288 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 CHP2O43745 196 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 PRKYO43930 277 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms