RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 FADDQ13158 208 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 KIR2DS1Q14954 304 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 GUSBP1Q15486 140 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 COQ5Q5HYK3 327 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 OR2B11Q5JQS5 317 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 GCSAMLQ5JQS6 135 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 OR10J3Q5JRS4 329 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 RBM48Q5RL73 367 aaKnown RBP1.69□□□□□ -2.14
SRP54-204ENST00000553923 C1orf100Q5SVJ3 147 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 FHL5Q5TD97 284 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 HBMQ6B0K9 141 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 C11orf71Q6IPW1 123 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 C2orf66Q6UXQ4 117 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 BAIAP2L2Q6UXY1 529 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 MOB1BQ7L9L4 216 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 HSD17B13Q7Z5P4 300 aaPredicted RBP1.69□□□□□ -2.14
SRP54-204ENST00000553923 TMEM135Q86UB9 458 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 LRRC34Q8IZ02 419 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 TMEM61Q8N0U2 210 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 PGAM4Q8N0Y7 254 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 CA13Q8N1Q1 262 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 LRRC52Q8N7C0 313 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 CCDC71LQ8N9Z2 235 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 GPR26Q8NDV2 337 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 LFNGQ8NES3 379 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 OR4K2Q8NGD2 314 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 OR51S1Q8NGJ8 323 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 OR5AR1Q8NGP9 310 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 OR5AK3PQ8NH89 298 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 TYMSOSQ8TAI1 123 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 UBA3Q8TBC4 463 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 TMEM234Q8WY98 164 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 OR5P2Q8WZ92 322 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 FGF14Q92915 247 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 MARC2Q969Z3 335 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 RPUSD4Q96CM3 377 aaKnown RBP1.69□□□□□ -2.14
SRP54-204ENST00000553923 FLYWCH2Q96CP2 140 aaKnown RBP1.69□□□□□ -2.14
SRP54-204ENST00000553923 ZNF488Q96MN9 340 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 Q96MT0 163 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 ZNF681Q96N22 645 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 VAT1Q99536 393 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 TSNAXQ99598 290 aaKnown RBP1.69□□□□□ -2.14
SRP54-204ENST00000553923 AGMATQ9BSE5 352 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 ZNF426Q9BUY5 554 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 GABARAPL3Q9BY60 117 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 C20orf85Q9H1P6 137 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 VCX3BQ9H321 246 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 SRMSQ9H3Y6 488 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 WDR54Q9H977 334 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 RDH14Q9HBH5 336 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 EXOSC4Q9NPD3 245 aaKnown RBP1.69□□□□□ -2.14
SRP54-204ENST00000553923 SLCO1B3Q9NPD5 702 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 ASCL3Q9NQ33 180 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.69□□□□□ -2.14
SRP54-204ENST00000553923 RGS18Q9NS28 235 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 ZNF629Q9UEG4 869 aaPredicted RBP1.69□□□□□ -2.14
SRP54-204ENST00000553923 SHPKQ9UHJ6 478 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 CFL2Q9Y281 166 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 KLF12Q9Y4X4 402 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 OR51B2Q9Y5P1 312 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 WIF1Q9Y5W5 379 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 UBIAD1Q9Y5Z9 338 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 MRPS18BQ9Y676 258 aaKnown RBP1.69□□□□□ -2.14
SRP54-204ENST00000553923 IGHV7-81A0A0B4J1V7 117 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 A0A1B0GTI1 187 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 CLDN34H7C241 214 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 CDX4O14627 284 aaPredicted RBP1.68□□□□□ -2.14
SRP54-204ENST00000553923 ERI3O43414 337 aaKnown RBP1.68□□□□□ -2.14
SRP54-204ENST00000553923 SULT1B1O43704 296 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 ZNF780AO75290 641 aaPredicted RBP1.68□□□□□ -2.14
SRP54-204ENST00000553923 TNFSF13O75888 250 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 KBTBD11O94819 623 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 SNAPINO95295 136 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 LYPLA2O95372 231 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 KLF8O95600 359 aaPredicted RBP1.68□□□□□ -2.14
SRP54-204ENST00000553923 TIMP1P01033 207 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 FABP3P05413 133 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 RPS17P08708 135 aaKnown RBP1.68□□□□□ -2.14
SRP54-204ENST00000553923 PGA4P0DJD7 388 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 PGA3P0DJD8 388 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 SMIM10L1P0DMW3 83 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 ERGP11308 486 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 UGT2B7P16662 529 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 F8A1P23610 371 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 GDF1P27539 372 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 GRPRP30550 384 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 GNRHRP30968 328 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 HOXA9P31269 272 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 HRH1P35367 487 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 COILP38432 576 aaPredicted RBP1.68□□□□□ -2.14
SRP54-204ENST00000553923 PPICP45877 212 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 PSMD7P51665 324 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 UBE2E1P51965 193 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 NCBP2P52298 156 aaKnown RBP eCLIP1.68□□□□□ -2.14
SRP54-204ENST00000553923 SLC25A1P53007 311 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 DLX1P56177 255 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 OR12D2P58182 307 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 ZNF121P58317 390 aaPredicted RBP1.68□□□□□ -2.14
SRP54-204ENST00000553923 TAS2R31P59538 309 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 TAS2R46P59540 309 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms