RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 RNASE2P10153 161 aaKnown RBP1.64□□□□□ -2.15
VRK1-202ENST00000553683 DBTP11182 482 aaKnown RBP1.64□□□□□ -2.15
VRK1-202ENST00000553683 CCNB1P14635 433 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 RPA2P15927 270 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 G0S2P27469 103 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 OR1E1P30953 314 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 CDKN2CP42773 168 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 SYKP43405 635 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 CAPZBP47756 277 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 KCNJ3P48549 501 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 GSSP48637 474 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 HCAR3P49019 387 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 TGM4P49221 684 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 RAP1GDS1P52306 607 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 AP1S2P56377 157 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 UBE2G2P60604 165 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 RPS21P63220 83 aaKnown RBP1.64□□□□□ -2.15
VRK1-202ENST00000553683 SLC7A9P82251 487 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 C2orf54Q08AI8 447 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 BST1Q10588 318 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 PRPSAP1Q14558 356 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 SF3A2Q15428 464 aaKnown RBP1.64□□□□□ -2.15
VRK1-202ENST00000553683 USF2Q15853 346 aaPredicted RBP1.64□□□□□ -2.15
VRK1-202ENST00000553683 ZCWPW2Q504Y3 356 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 SPANXN2Q5MJ10 180 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 DNLZQ5SXM8 178 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 C6orf183Q5T699 404 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 CARD17Q5XLA6 110 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 ZNF470Q6ECI4 717 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 PMF1Q6P1K2 205 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 C3orf33Q6P1S2 294 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 NPSR1Q6W5P4 371 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 VTCN1Q7Z7D3 282 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 SLC13A5Q86YT5 568 aaPredicted RBP1.64□□□□□ -2.15
VRK1-202ENST00000553683 LRRC8AQ8IWT6 810 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 TMEM123Q8N131 208 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 CEP112Q8N8E3 955 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 GATSQ8NAP1 163 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 MFSD9Q8NBP5 474 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 C19orf18Q8NEA5 215 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 NOXO1Q8NFA2 376 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 SLC2A14Q8TDB8 520 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 NELFBQ8WX92 580 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 PLEKHA8Q96JA3 519 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 DNAJC1Q96KC8 554 aaKnown RBP1.64□□□□□ -2.15
VRK1-202ENST00000553683 PANX1Q96RD7 426 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 ZNF607Q96SK3 696 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 NPY6RQ99463 290 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 CHP1Q99653 195 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 BPIFA3Q9BQP9 254 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 SLC22A4Q9H015 551 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 SPNS1Q9H2V7 528 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 FN3KRPQ9HA64 309 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 CSNK1G1Q9HCP0 422 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 CCNB1IP1Q9NPC3 277 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 SLCO1B3Q9NPD5 702 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 ADAP2Q9NPF8 381 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 AHSPQ9NZD4 102 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 RAB23Q9ULC3 237 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 MMP17Q9ULZ9 603 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 POFUT2Q9Y2G5 429 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 SLC22A7Q9Y694 548 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 KIAA0556O60303 1618 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 GOLGB1Q14789 3259 aaKnown RBP1.64□□□□□ -2.15
VRK1-202ENST00000553683 NPATQ14207 1427 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 ERBINQ96RT1 1412 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 PCDH11XQ9BZA7 1347 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 UNC80Q8N2C7 3258 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 NCAPD3P42695 1498 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 BCORL1Q5H9F3 1711 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 RFX7Q2KHR2 1363 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 IGHV3-74A0A0B4J1X5 117 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 PVALEFA0A1B0GWK0 134 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 A0A1W2PPV4 95 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 PCP4L1A6NKN8 68 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 TRPC5OSA6NMA1 111 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 ZNF729A6NN14 1252 aaPredicted RBP1.63□□□□□ -2.15
VRK1-202ENST00000553683 TMEM114B3SHH9 223 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 ATP6V1G2-DDX39BF2Z307 99 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 KLRC4-KLRK1H3BQV0 150 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 EIF3HO15372 352 aaKnown RBP eCLIP1.63□□□□□ -2.15
VRK1-202ENST00000553683 CDH16O75309 829 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 SNNO75324 88 aaPredicted RBP1.63□□□□□ -2.15
VRK1-202ENST00000553683 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 SRP72O76094 671 aaKnown RBP1.63□□□□□ -2.15
VRK1-202ENST00000553683 RHOBTB1O94844 696 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 SLC25A14O95258 325 aaPredicted RBP1.63□□□□□ -2.15
VRK1-202ENST00000553683 MPZL1O95297 269 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 CLDN9O95484 217 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 IGHV2-5P01817 119 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 IFNA6P05013 189 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 CRHP06850 196 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 ANXA5P08758 320 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 KRT16P08779 473 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 SLC35E2BP0CK96 405 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 PSKH1P11801 424 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 FOLR1P15328 257 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 MSR1P21757 451 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 HMGB2P26583 209 aaKnown RBP1.63□□□□□ -2.15
VRK1-202ENST00000553683 CD40LGP29965 261 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms