RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 OR9Q1Q8NGQ5 310 aa9.88□□□□□ -0.83
SRP54-203ENST00000553544 GIPC3Q8TF64 312 aa9.88□□□□□ -0.83
SRP54-203ENST00000553544 ITLN1Q8WWA0 313 aa9.88□□□□□ -0.83
SRP54-203ENST00000553544 NRBF2Q96F24 287 aa9.88□□□□□ -0.83
SRP54-203ENST00000553544 SIGLEC11Q96RL6 698 aa9.88□□□□□ -0.83
SRP54-203ENST00000553544 SLC30A2Q9BRI3 323 aa9.88□□□□□ -0.83
SRP54-203ENST00000553544 WDR76Q9H967 626 aa9.88□□□□□ -0.83
SRP54-203ENST00000553544 ARMC1Q9NVT9 282 aa9.88□□□□□ -0.83
SRP54-203ENST00000553544 SOX21Q9Y651 276 aaPredicted RBP9.88□□□□□ -0.83
SRP54-203ENST00000553544 COMMD3-BMI1R4GMX3 469 aa9.88□□□□□ -0.83
SRP54-203ENST00000553544 CLPSL1A2RUU4 121 aa9.87□□□□□ -0.83
SRP54-203ENST00000553544 TVP23AA6NH52 213 aa9.87□□□□□ -0.83
SRP54-203ENST00000553544 A8MXK9 166 aa9.87□□□□□ -0.83
SRP54-203ENST00000553544 SURF4O15260 269 aa9.87□□□□□ -0.83
SRP54-203ENST00000553544 MLNRO43193 412 aa9.87□□□□□ -0.83
SRP54-203ENST00000553544 IFNGP01579 166 aa9.87□□□□□ -0.83
SRP54-203ENST00000553544 SPI1P17947 270 aa9.87□□□□□ -0.83
SRP54-203ENST00000553544 CPT2P23786 658 aa9.87□□□□□ -0.83
SRP54-203ENST00000553544 FASP25445 335 aa9.87□□□□□ -0.83
SRP54-203ENST00000553544 RBMXP38159 391 aaKnown RBP9.87□□□□□ -0.83
SRP54-203ENST00000553544 GK2Q14410 553 aaPredicted RBP9.87□□□□□ -0.83
SRP54-203ENST00000553544 LINC01590Q5TEZ4 76 aa9.87□□□□□ -0.83
SRP54-203ENST00000553544 SLC27A4Q6P1M0 643 aa9.87□□□□□ -0.83
SRP54-203ENST00000553544 RHOUQ7L0Q8 258 aa9.87□□□□□ -0.83
SRP54-203ENST00000553544 OR5AS1Q8N127 324 aa9.87□□□□□ -0.83
SRP54-203ENST00000553544 ZNF511Q8NB15 262 aa9.87□□□□□ -0.83
SRP54-203ENST00000553544 PAPD5Q8NDF8 572 aaKnown RBP9.87□□□□□ -0.83
SRP54-203ENST00000553544 OR13G1Q8NGZ3 307 aa9.87□□□□□ -0.83
SRP54-203ENST00000553544 TEX47Q8TBZ9 253 aa9.87□□□□□ -0.83
SRP54-203ENST00000553544 UPRTQ96BW1 309 aa9.87□□□□□ -0.83
SRP54-203ENST00000553544 ZNF582Q96NG8 517 aaPredicted RBP9.87□□□□□ -0.83
SRP54-203ENST00000553544 OR2V2Q96R30 315 aa9.87□□□□□ -0.83
SRP54-203ENST00000553544 RBM4BQ9BQ04 359 aaKnown RBP9.87□□□□□ -0.83
SRP54-203ENST00000553544 PRRG3Q9BZD7 231 aa9.87□□□□□ -0.83
SRP54-203ENST00000553544 GCM1Q9NP62 436 aa9.87□□□□□ -0.83
SRP54-203ENST00000553544 CMC2Q9NRP2 79 aa9.87□□□□□ -0.83
SRP54-203ENST00000553544 KIF17Q9P2E2 1029 aa9.87□□□□□ -0.83
SRP54-203ENST00000553544 SRRM5B3KS81 715 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 H0YL77 283 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 M0R135 149 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 NDUFA7O95182 113 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 PLATP00750 562 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 LCATP04180 440 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 GYPBP06028 91 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 WNT2P09544 360 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 CLUP10909 449 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 SELEP16581 610 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 ANOS1P23352 680 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 FMO3P31513 532 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 GRK5P34947 590 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 ENTPD1P49961 510 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 BLVRAP53004 296 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 TPTEP56180 551 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 SEC61A1P61619 476 aaKnown RBP9.86□□□□□ -0.83
SRP54-203ENST00000553544 BTG1P62324 171 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 PDCD1Q15116 288 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 ZMYND11Q15326 602 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 TAF9Q16594 264 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 ASPHD2Q6ICH7 369 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 ZFP1Q6P2D0 407 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 FIP1L1Q6UN15 594 aaKnown RBP9.86□□□□□ -0.83
SRP54-203ENST00000553544 DCXRQ7Z4W1 244 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 ATG16L2Q8NAA4 619 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 ZNF799Q96GE5 643 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 MEGF10Q96KG7 1140 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 OSBPL10Q9BXB5 764 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 HCAR1Q9BXC0 346 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 PRDM13Q9H4Q3 707 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 NOX4Q9NPH5 578 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 TNFRSF19Q9NS68 423 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 C1RLQ9NZP8 487 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 PPP1R3CQ9UQK1 317 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 AP4S1Q9Y587 144 aa9.86□□□□□ -0.83
SRP54-203ENST00000553544 F5H0A9 414 aaPredicted RBP9.85□□□□□ -0.83
SRP54-203ENST00000553544 TMEM178BH3BS89 294 aa9.85□□□□□ -0.83
SRP54-203ENST00000553544 ZNF593O00488 134 aaPredicted RBP9.85□□□□□ -0.83
SRP54-203ENST00000553544 ZNF3P17036 446 aa9.85□□□□□ -0.83
SRP54-203ENST00000553544 MDH2P40926 338 aaKnown RBP9.85□□□□□ -0.83
SRP54-203ENST00000553544 GATA4P43694 442 aa9.85□□□□□ -0.83
SRP54-203ENST00000553544 MMP16P51512 607 aa9.85□□□□□ -0.83
SRP54-203ENST00000553544 BPIFB3P59826 476 aa9.85□□□□□ -0.83
SRP54-203ENST00000553544 ZNF181Q2M3W8 571 aa9.85□□□□□ -0.83
SRP54-203ENST00000553544 DEFB112Q30KQ8 113 aa9.85□□□□□ -0.83
SRP54-203ENST00000553544 SNAI3Q3KNW1 292 aa9.85□□□□□ -0.83
SRP54-203ENST00000553544 DRAM2Q6UX65 266 aa9.85□□□□□ -0.83
SRP54-203ENST00000553544 PGAP1Q75T13 922 aa9.85□□□□□ -0.83
SRP54-203ENST00000553544 ASRGL1Q7L266 308 aa9.85□□□□□ -0.83
SRP54-203ENST00000553544 C1QL4Q86Z23 238 aa9.85□□□□□ -0.83
SRP54-203ENST00000553544 HS3ST5Q8IZT8 346 aa9.85□□□□□ -0.83
SRP54-203ENST00000553544 MUC20Q8N307 709 aaPredicted RBP9.85□□□□□ -0.83
SRP54-203ENST00000553544 OR10AD1Q8NGE0 317 aa9.85□□□□□ -0.83
SRP54-203ENST00000553544 RAB40AQ8WXH6 277 aa9.85□□□□□ -0.83
SRP54-203ENST00000553544 SPTSSAQ969W0 71 aa9.85□□□□□ -0.83
SRP54-203ENST00000553544 SLCO4A1Q96BD0 722 aa9.85□□□□□ -0.83
SRP54-203ENST00000553544 SLAMF6Q96DU3 332 aa9.85□□□□□ -0.83
SRP54-203ENST00000553544 DUS3LQ96G46 650 aaKnown RBP9.85□□□□□ -0.83
SRP54-203ENST00000553544 KCNJ15Q99712 375 aa9.85□□□□□ -0.83
SRP54-203ENST00000553544 SSBP3Q9BWW4 388 aaPredicted RBP9.85□□□□□ -0.83
SRP54-203ENST00000553544 MARCH7Q9H992 704 aa9.85□□□□□ -0.83
SRP54-203ENST00000553544 TMEM100Q9NV29 134 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms