RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 ADRA2CP18825 462 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 PRKACGP22612 351 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 DDOSTP39656 456 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 CX3CR1P49238 355 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 CDK5Q00535 292 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 MZT1Q08AG7 82 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 ZNF154Q13106 437 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 ZNF404Q494X3 552 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 SPATC1Q76KD6 591 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 NLRC3Q7RTR2 1065 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 TIGD4Q8IY51 512 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 HS3ST5Q8IZT8 346 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 DEFB108BQ8NET1 73 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 SEMA6DQ8NFY4 1073 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 RNF133Q8WVZ7 376 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 DNAJC9Q8WXX5 260 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 NRBF2Q96F24 287 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 PLEKHA8Q96JA3 519 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 JMJD8Q96S16 334 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 TMEM246Q9BRR3 403 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 ABHD6Q9BV23 337 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 SSBP3Q9BWW4 388 aaPredicted RBP10.86□□□□□ -0.67
ACTN1-207ENST00000553290 SUCNR1Q9BXA5 334 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 FN3KRPQ9HA64 309 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 MMP26Q9NRE1 261 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 OR5V1Q9UGF6 321 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 N6AMT1Q9Y5N5 214 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 INSIG2Q9Y5U4 225 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 DOCK11Q5JSL3 2073 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-207ENST00000553290 C5orf63A6NC05 138 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 GSC2O15499 205 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 TBX1O43435 398 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 FAM20BO75063 409 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 ZNF205O95201 554 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 PTBP3O95758 552 aaKnown RBP10.85□□□□□ -0.67
ACTN1-207ENST00000553290 FSHBP01225 129 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 ANXA2P07355 339 aaKnown RBP10.85□□□□□ -0.67
ACTN1-207ENST00000553290 ANOS1P23352 680 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 CFL1P23528 166 aaKnown RBP10.85□□□□□ -0.67
ACTN1-207ENST00000553290 FPR2P25090 351 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 RASSF2P50749 326 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 HILS1P60008 231 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 GNB2P62879 340 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 SLC35D3Q5M8T2 416 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 PRAMEF6Q5VXH4 476 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 PLBD1Q6P4A8 553 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 DCDC5Q6ZRR9 648 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 ZNF454Q8N9F8 522 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 OR8B3Q8NGG8 313 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 OR56B2PQ8NGI1 322 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 OR52H1Q8NGJ2 320 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 ZMYND19Q96E35 227 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-207ENST00000553290 NEIL1Q96FI4 390 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-207ENST00000553290 OR8B2Q96RD0 313 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 MRI1Q9BV20 369 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 CADM1Q9BY67 442 aaKnown RBP10.85□□□□□ -0.67
ACTN1-207ENST00000553290 UFSP2Q9NUQ7 469 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 RNF7Q9UBF6 113 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 AUP1Q9Y679 476 aa10.85□□□□□ -0.67
ACTN1-207ENST00000553290 FBN3Q75N90 2809 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 ANKRD30BLA7E2S9 258 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 LYNP07948 512 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 H2BFMP0C1H6 154 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 OPRL1P41146 370 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 BNIP1Q12981 228 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 MPPED2Q15777 294 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 KCNJ8Q15842 424 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 TIGD6Q17RP2 521 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 KLHL12Q53G59 568 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 ARMCX4Q5H9R4 360 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 FAM201AQ5SY85 155 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 SLC16A9Q7RTY1 509 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-207ENST00000553290 CPOQ8IVL8 374 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 BPIFB2Q8N4F0 458 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 OTOSQ8NHW6 89 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 THEM6Q8WUY1 208 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 SGK3Q96BR1 496 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 REEP6Q96HR9 211 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 OR10A2Q9H208 303 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 NTN4Q9HB63 628 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 SLC25A19Q9HC21 320 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 C14orf119Q9NWQ9 140 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 KIF17Q9P2E2 1029 aa10.84□□□□□ -0.67
ACTN1-207ENST00000553290 TRIM77I1YAP6 450 aa10.83□□□□□ -0.68
ACTN1-207ENST00000553290 SELENOFO60613 162 aa10.83□□□□□ -0.68
ACTN1-207ENST00000553290 ATP5HO75947 161 aa10.83□□□□□ -0.68
ACTN1-207ENST00000553290 PPIAL4GP0DN37 164 aa10.83□□□□□ -0.68
ACTN1-207ENST00000553290 PITPNBP48739 271 aa10.83□□□□□ -0.68
ACTN1-207ENST00000553290 CRISP1P54107 249 aa10.83□□□□□ -0.68
ACTN1-207ENST00000553290 ZNF121P58317 390 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-207ENST00000553290 FAM3AP98173 230 aa10.83□□□□□ -0.68
ACTN1-207ENST00000553290 PAX2Q02962 417 aa10.83□□□□□ -0.68
ACTN1-207ENST00000553290 PAX8Q06710 450 aa10.83□□□□□ -0.68
ACTN1-207ENST00000553290 SNCBQ16143 134 aa10.83□□□□□ -0.68
ACTN1-207ENST00000553290 BTNL3Q6UXE8 466 aa10.83□□□□□ -0.68
ACTN1-207ENST00000553290 LRRN1Q6UXK5 716 aa10.83□□□□□ -0.68
ACTN1-207ENST00000553290 FAM57BQ71RH2 274 aa10.83□□□□□ -0.68
ACTN1-207ENST00000553290 PRSS45Q7RTY3 260 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms