RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 A0A1B0GW55 424 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 A0A1W2PRD5 423 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 A0A1W2PRF3 423 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 A0A1W2PRM7 423 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 CLDN24A6NM45 220 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 A8MT66 165 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 DIRC3C9JPN6 131 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 BIRC5O15392 142 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 SYNGR1O43759 233 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 BCAS1O75363 584 aaPredicted RBP4.16□□□□□ -1.74
CKAP4-203ENST00000553039 C6orf47O95873 294 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 IGF2P01344 180 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 IFNA6P05013 189 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 DUX4L2P0CJ85 424 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 DUX4L3P0CJ86 424 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 DUX4L5P0CJ88 424 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 DUX4L6P0CJ89 424 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 DUX4L7P0CJ90 424 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 LAMP1P11279 417 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 ETFAP13804 333 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 GRPRP30550 384 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 SAA4P35542 130 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 VDAC2P45880 294 aaPredicted RBP4.16□□□□□ -1.74
CKAP4-203ENST00000553039 HTR6P50406 440 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 PCBD1P61457 104 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 RPS7P62081 194 aaKnown RBP4.16□□□□□ -1.74
CKAP4-203ENST00000553039 TXNL4AP83876 142 aaKnown RBP4.16□□□□□ -1.74
CKAP4-203ENST00000553039 ALKBH1Q13686 389 aaKnown RBP4.16□□□□□ -1.74
CKAP4-203ENST00000553039 KCNMB1Q16558 191 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 ZSCAN26Q16670 478 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 C9orf66Q5T8R8 295 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 TMEM88Q6PEY1 159 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 SLC2A7Q6PXP3 512 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 CRIP3Q6Q6R5 217 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 DUX4L9Q6RFH8 374 aaPredicted RBP4.16□□□□□ -1.74
CKAP4-203ENST00000553039 CBLL1Q75N03 491 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 LINC00346Q8IVM7 164 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 LRRC18Q8N456 261 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 C11orf65Q8NCR3 313 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 OR5L1Q8NGL2 311 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 OR6S1Q8NH40 331 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 TMEM54Q969K7 222 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 TAAR8Q969N4 342 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 VPS33AQ96AX1 596 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 COQ8BQ96D53 544 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 SLC35G5Q96KT7 338 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 ZNF582Q96NG8 517 aaPredicted RBP4.16□□□□□ -1.74
CKAP4-203ENST00000553039 CCDC115Q96NT0 180 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 TRNT1Q96Q11 434 aaKnown RBP4.16□□□□□ -1.74
CKAP4-203ENST00000553039 RAB3IPQ96QF0 476 aaPredicted RBP4.16□□□□□ -1.74
CKAP4-203ENST00000553039 PRR25Q96S07 402 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 ABHD1Q96SE0 405 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 EPYCQ99645 322 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 SEMA6AQ9H2E6 1030 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 OR51I1Q9H343 314 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 ZNF702PQ9H963 129 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 C12orf10Q9HB07 376 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 ONECUT1Q9UBC0 465 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 RPS6KB2Q9UBS0 482 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 DUX4Q9UBX2 424 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 OAZ3Q9UMX2 235 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 TIMM10BQ9Y5J6 103 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 SESN1Q9Y6P5 492 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 A0A087WUJ7 227 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 WDR91A4D1P6 747 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 ERICH4A6NGS2 130 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 F5H697 171 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 LGALS8O00214 317 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 EBAG9O00559 213 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 RNASET2O00584 256 aaKnown RBP4.15□□□□□ -1.75
CKAP4-203ENST00000553039 DVL1O14640 695 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 OR10H3O60404 316 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 PLIN3O60664 434 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 FMO6PO60774 539 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 LY6G6CO95867 125 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 MMP7P09237 267 aaPredicted RBP4.15□□□□□ -1.75
CKAP4-203ENST00000553039 GKN3PP0CG01 181 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 MED14OSP0DP75 135 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 TROVE2P10155 538 aaKnown RBP eCLIP4.15□□□□□ -1.75
CKAP4-203ENST00000553039 MYL2P10916 166 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 G6PDP11413 515 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 HLA-DOBP13765 273 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 GABRB1P18505 474 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 SDC1P18827 310 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 PRPS1L1P21108 318 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 ALDH3A1P30838 453 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 SOAT1P35610 550 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 WNT5AP41221 380 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 SLC15A1P46059 708 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 THBS3P49746 956 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 GSK3BP49841 420 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 BIDP55957 195 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 IL5RAQ01344 420 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 PUDPQ08623 228 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 PTGR1Q14914 329 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 OR8B8Q15620 311 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 RFTN2Q52LD8 501 aaPredicted RBP4.15□□□□□ -1.75
CKAP4-203ENST00000553039 RABL3Q5HYI8 236 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 MRPL2Q5T653 305 aaKnown RBP4.15□□□□□ -1.75
CKAP4-203ENST00000553039 LRRC74BQ6ZQY2 392 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms