RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 PRKDCP78527 4128 aaKnown RBP9.93□□□□□ -0.82
CKAP4-202ENST00000552828 TVP23AA6NH52 213 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 FAM183AA6NL82 134 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 PRR23D1E9PI22 279 aaPredicted RBP9.93□□□□□ -0.82
CKAP4-202ENST00000552828 TMEM178BH3BS89 294 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 IFNL4K9M1U5 179 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 RER1O15258 196 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 DOK2O60496 412 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 FSTL3O95633 263 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 BAG2O95816 211 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 ABHD16AO95870 558 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 GYPBP06028 91 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 WNT2P09544 360 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 PRR23D2P0DMB1 279 aaPredicted RBP9.93□□□□□ -0.82
CKAP4-202ENST00000552828 GGT2P36268 569 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 RBMXP38159 391 aaKnown RBP9.93□□□□□ -0.82
CKAP4-202ENST00000552828 HTR5AP47898 357 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 OCLNQ16625 522 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 PLBD1Q6P4A8 553 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 CORO6Q6QEF8 472 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 VASH1Q7L8A9 365 aaPredicted RBP9.93□□□□□ -0.82
CKAP4-202ENST00000552828 CPOQ8IVL8 374 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 MUC20Q8N307 709 aaPredicted RBP9.93□□□□□ -0.82
CKAP4-202ENST00000552828 OR2Z1Q8NG97 314 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 OR6K6Q8NGW6 343 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 OR1F12Q8NHA8 337 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 ZNRF4Q8WWF5 429 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 PTP4A1Q93096 173 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 CMBLQ96DG6 245 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 COG8Q96MW5 612 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 C9orf16Q9BUW7 83 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 OR51V1Q9H2C8 321 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 MED20Q9H944 212 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 GCM1Q9NP62 436 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 MRPL22Q9NWU5 206 aaKnown RBP9.93□□□□□ -0.82
CKAP4-202ENST00000552828 CYB5R1Q9UHQ9 305 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 LRCH1Q9Y2L9 728 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 ORC6Q9Y5N6 252 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 LHFPL6Q9Y693 200 aa9.93□□□□□ -0.82
CKAP4-202ENST00000552828 TANC2Q9HCD6 1990 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 OR6C6A6NF89 314 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 ZAR1LA6NP61 321 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 CEACAM18A8MTB9 384 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 J3QW42 95 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 GLCEO94923 617 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 PLATP00750 562 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 ALPLP05186 524 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 CLUP10909 449 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 EPHA2P29317 976 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 MTNR1AP48039 350 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 ALDH3A2P51648 485 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 HIST1H3AP68431 136 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 RCN1Q15293 331 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 CCDC92Q53HC0 331 aaPredicted RBP9.92□□□□□ -0.82
CKAP4-202ENST00000552828 ESCO2Q56NI9 601 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 HIST2H3PS2Q5TEC6 136 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 SLX4IPQ5VYV7 408 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 SLC18B1Q6NT16 456 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 LRRN1Q6UXK5 716 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 HIST2H3AQ71DI3 136 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 LINC00346Q8IVM7 164 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 CBR4Q8N4T8 237 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 ZNF511Q8NB15 262 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 ITLN1Q8WWA0 313 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 UPRTQ96BW1 309 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 OR2V2Q96R30 315 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 PITX2Q99697 317 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 HCAR1Q9BXC0 346 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 GABARAPL3Q9BY60 117 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 MS4A7Q9GZW8 240 aaPredicted RBP9.92□□□□□ -0.82
CKAP4-202ENST00000552828 HDHD2Q9H0R4 259 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 RIBC2Q9H4K1 309 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 PRDM13Q9H4Q3 707 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 TMEM165Q9HC07 324 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 USE1Q9NZ43 259 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 OR5V1Q9UGF6 321 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 ATPIF1Q9UII2 106 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 STARD10Q9Y365 291 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 MMP24Q9Y5R2 645 aa9.92□□□□□ -0.82
CKAP4-202ENST00000552828 ZNF593O00488 134 aaPredicted RBP9.91□□□□□ -0.82
CKAP4-202ENST00000552828 EI24O14681 340 aa9.91□□□□□ -0.82
CKAP4-202ENST00000552828 PRODHO43272 600 aa9.91□□□□□ -0.82
CKAP4-202ENST00000552828 IGHV4-38-2P0DP08 117 aa9.91□□□□□ -0.82
CKAP4-202ENST00000552828 RAC2P15153 192 aa9.91□□□□□ -0.82
CKAP4-202ENST00000552828 GSTT1P30711 240 aa9.91□□□□□ -0.82
CKAP4-202ENST00000552828 ENTPD1P49961 510 aa9.91□□□□□ -0.82
CKAP4-202ENST00000552828 MMP16P51512 607 aa9.91□□□□□ -0.82
CKAP4-202ENST00000552828 RAD23AP54725 363 aa9.91□□□□□ -0.82
CKAP4-202ENST00000552828 RPS7P62081 194 aaKnown RBP9.91□□□□□ -0.82
CKAP4-202ENST00000552828 DEFA6Q01524 100 aa9.91□□□□□ -0.82
CKAP4-202ENST00000552828 ECH1Q13011 328 aa9.91□□□□□ -0.82
CKAP4-202ENST00000552828 KLHL12Q53G59 568 aa9.91□□□□□ -0.82
CKAP4-202ENST00000552828 TEX30Q5JUR7 227 aa9.91□□□□□ -0.82
CKAP4-202ENST00000552828 SLC35D3Q5M8T2 416 aa9.91□□□□□ -0.82
CKAP4-202ENST00000552828 LINC01590Q5TEZ4 76 aa9.91□□□□□ -0.82
CKAP4-202ENST00000552828 C16orf87Q6PH81 154 aa9.91□□□□□ -0.82
CKAP4-202ENST00000552828 ZBTB49Q6ZSB9 765 aa9.91□□□□□ -0.82
CKAP4-202ENST00000552828 EME1Q96AY2 570 aa9.91□□□□□ -0.82
CKAP4-202ENST00000552828 COQ7Q99807 217 aa9.91□□□□□ -0.82
CKAP4-202ENST00000552828 WDR76Q9H967 626 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms