RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 ZNF92Q03936 586 aa13.4□□□□□ -0.26
RAB5C-209ENST00000552162 PRB3Q04118 309 aaPredicted RBP13.4□□□□□ -0.26
RAB5C-209ENST00000552162 SNAI3Q3KNW1 292 aa13.4□□□□□ -0.26
RAB5C-209ENST00000552162 DUX4L9Q6RFH8 374 aaPredicted RBP13.4□□□□□ -0.26
RAB5C-209ENST00000552162 FKBP9P1Q75LS8 142 aa13.4□□□□□ -0.26
RAB5C-209ENST00000552162 TSEN54Q7Z6J9 526 aaKnown RBP13.4□□□□□ -0.26
RAB5C-209ENST00000552162 CYP4Z1Q86W10 505 aa13.4□□□□□ -0.26
RAB5C-209ENST00000552162 LY6G5BQ8NDX9 201 aa13.4□□□□□ -0.26
RAB5C-209ENST00000552162 OR2AE1Q8NHA4 323 aa13.4□□□□□ -0.26
RAB5C-209ENST00000552162 ZNF799Q96GE5 643 aa13.4□□□□□ -0.26
RAB5C-209ENST00000552162 PPA2Q9H2U2 334 aa13.4□□□□□ -0.26
RAB5C-209ENST00000552162 GID8Q9NWU2 228 aa13.4□□□□□ -0.26
RAB5C-209ENST00000552162 MRPL15Q9P015 296 aaKnown RBP13.4□□□□□ -0.26
RAB5C-209ENST00000552162 GMPR2Q9P2T1 348 aaKnown RBP13.4□□□□□ -0.26
RAB5C-209ENST00000552162 DUX4Q9UBX2 424 aa13.4□□□□□ -0.26
RAB5C-209ENST00000552162 FBLN5Q9UBX5 448 aa13.4□□□□□ -0.26
RAB5C-209ENST00000552162 CYB5R1Q9UHQ9 305 aa13.4□□□□□ -0.26
RAB5C-209ENST00000552162 KMT2CQ8NEZ4 4911 aaKnown RBP13.39□□□□□ -0.27
RAB5C-209ENST00000552162 A0A1W2PRD5 423 aa13.39□□□□□ -0.27
RAB5C-209ENST00000552162 A0A1W2PRF3 423 aa13.39□□□□□ -0.27
RAB5C-209ENST00000552162 A0A1W2PRM7 423 aa13.39□□□□□ -0.27
RAB5C-209ENST00000552162 RNASEK-C17orf49H0YIS7 233 aa13.39□□□□□ -0.27
RAB5C-209ENST00000552162 NPFFO15130 113 aa13.39□□□□□ -0.27
RAB5C-209ENST00000552162 PAHP00439 452 aa13.39□□□□□ -0.27
RAB5C-209ENST00000552162 LHBP01229 141 aa13.39□□□□□ -0.27
RAB5C-209ENST00000552162 ANOS1P23352 680 aa13.39□□□□□ -0.27
RAB5C-209ENST00000552162 KLF10Q13118 480 aa13.39□□□□□ -0.27
RAB5C-209ENST00000552162 MAPRE2Q15555 327 aa13.39□□□□□ -0.27
RAB5C-209ENST00000552162 RFX4Q33E94 735 aa13.39□□□□□ -0.27
RAB5C-209ENST00000552162 SLC36A3Q495N2 470 aa13.39□□□□□ -0.27
RAB5C-209ENST00000552162 FGD3Q5JSP0 725 aa13.39□□□□□ -0.27
RAB5C-209ENST00000552162 CBLL1Q75N03 491 aa13.39□□□□□ -0.27
RAB5C-209ENST00000552162 CMTM4Q8IZR5 234 aa13.39□□□□□ -0.27
RAB5C-209ENST00000552162 SPERTQ8NA61 448 aa13.39□□□□□ -0.27
RAB5C-209ENST00000552162 OR5R1Q8NH85 324 aa13.39□□□□□ -0.27
RAB5C-209ENST00000552162 MRAPQ8TCY5 172 aa13.39□□□□□ -0.27
RAB5C-209ENST00000552162 ERMAPQ96PL5 475 aaPredicted RBP13.39□□□□□ -0.27
RAB5C-209ENST00000552162 NMNAT3Q96T66 252 aa13.39□□□□□ -0.27
RAB5C-209ENST00000552162 RPRD1BQ9NQG5 326 aaKnown RBP13.39□□□□□ -0.27
RAB5C-209ENST00000552162 DNAJB11Q9UBS4 358 aa13.39□□□□□ -0.27
RAB5C-209ENST00000552162 ENPP4Q9Y6X5 453 aa13.39□□□□□ -0.27
RAB5C-209ENST00000552162 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.38□□□□□ -0.27
RAB5C-209ENST00000552162 LOC100653049A0A140TA62 436 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 A0A1W2PRQ8 180 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 UNC119BA6NIH7 251 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 CXCR6O00574 342 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 BHLHE40O14503 412 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 GPR37O15354 613 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 KRT34O76011 436 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 RENP00797 406 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 HLA-DQA2P01906 255 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 H1F0P07305 194 aaKnown RBP13.38□□□□□ -0.27
RAB5C-209ENST00000552162 DLX1P56177 255 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 ELF3P78545 371 aaPredicted RBP13.38□□□□□ -0.27
RAB5C-209ENST00000552162 MZT1Q08AG7 82 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 KLRD1Q13241 179 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 DGCR6Q14129 220 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 PCK2Q16822 640 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 MICBQ29980 383 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 WDR38Q5JTN6 314 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 GLYATL3Q5SZD4 288 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 SMARCD3Q6STE5 483 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 LNX2Q8N448 690 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 FAM216BQ8N7L0 139 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 C11orf44Q8N8P7 122 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 FANK1Q8TC84 345 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 SPTSSAQ969W0 71 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 MAP6Q96JE9 813 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 CCL13Q99616 98 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 MRGBPQ9NV56 204 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 C14orf119Q9NWQ9 140 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 CMTM6Q9NX76 183 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 SIGLEC9Q9Y336 463 aa13.38□□□□□ -0.27
RAB5C-209ENST00000552162 DNAH3Q8TD57 4116 aa13.37□□□□□ -0.27
RAB5C-209ENST00000552162 MEIOCA2RUB1 952 aa13.37□□□□□ -0.27
RAB5C-209ENST00000552162 SERPINA1P01009 418 aa13.37□□□□□ -0.27
RAB5C-209ENST00000552162 TROVE2P10155 538 aaKnown RBP eCLIP13.37□□□□□ -0.27
RAB5C-209ENST00000552162 MUC1P15941 1255 aaPredicted RBP13.37□□□□□ -0.27
RAB5C-209ENST00000552162 SAA4P35542 130 aa13.37□□□□□ -0.27
RAB5C-209ENST00000552162 C1orf122Q6ZSJ8 110 aa13.37□□□□□ -0.27
RAB5C-209ENST00000552162 SLC36A1Q7Z2H8 476 aa13.37□□□□□ -0.27
RAB5C-209ENST00000552162 ZBTB46Q86UZ6 589 aa13.37□□□□□ -0.27
RAB5C-209ENST00000552162 PNKDQ8N490 385 aa13.37□□□□□ -0.27
RAB5C-209ENST00000552162 OR56B2PQ8NGI1 322 aa13.37□□□□□ -0.27
RAB5C-209ENST00000552162 OR4K13Q8NH42 304 aa13.37□□□□□ -0.27
RAB5C-209ENST00000552162 LRRC29Q8WV35 223 aa13.37□□□□□ -0.27
RAB5C-209ENST00000552162 PPP1R14AQ96A00 147 aa13.37□□□□□ -0.27
RAB5C-209ENST00000552162 DMRTB1Q96MA1 342 aa13.37□□□□□ -0.27
RAB5C-209ENST00000552162 FN3KQ9H479 309 aa13.37□□□□□ -0.27
RAB5C-209ENST00000552162 TOR3AQ9H497 397 aa13.37□□□□□ -0.27
RAB5C-209ENST00000552162 KRCC1Q9NPI7 259 aaPredicted RBP13.37□□□□□ -0.27
RAB5C-209ENST00000552162 ADA2Q9NZK5 511 aa13.37□□□□□ -0.27
RAB5C-209ENST00000552162 FOXJ3Q9UPW0 622 aa13.37□□□□□ -0.27
RAB5C-209ENST00000552162 NOTCH3Q9UM47 2321 aa13.36□□□□□ -0.27
RAB5C-209ENST00000552162 TRBV4-1A0A0J9YWV2 114 aa13.36□□□□□ -0.27
RAB5C-209ENST00000552162 GSTA4O15217 222 aa13.36□□□□□ -0.27
RAB5C-209ENST00000552162 HIST1H1CP16403 213 aaKnown RBP13.36□□□□□ -0.27
RAB5C-209ENST00000552162 EFNB2P52799 333 aa13.36□□□□□ -0.27
RAB5C-209ENST00000552162 SEC23BQ15437 767 aa13.36□□□□□ -0.27
RAB5C-209ENST00000552162 Q8N7P7 452 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms