RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 WDR76Q9H967 626 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 RAB18Q9NP72 206 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 MEPEQ9NQ76 525 aaPredicted RBP4.36□□□□□ -1.71
HOXB3-213ENST00000552000 POLE4Q9NR33 117 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 SERTAD4Q9NUC0 356 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 PNPOQ9NVS9 261 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 SLC7A7Q9UM01 511 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 RAP2CQ9Y3L5 183 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 IGHV3OR15-7A0A075B7D8 119 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 TRAV38-1A0A0B4J264 116 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 A0A1B0GW55 424 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 TRAPPC13A5PLN9 417 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 PRORSD1PA6NEY8 169 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 OOEPA6NGQ2 149 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 NUDT19A8MXV4 375 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 IQCF6A8MYZ5 107 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 FBP2O00757 339 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 NDUFA2O43678 99 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 SERPINB7O75635 380 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 SLC22A3O75751 556 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 OR7A10O76100 309 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 NHLRC4P0CG21 123 aaPredicted RBP4.35□□□□□ -1.71
HOXB3-213ENST00000552000 DUX4L2P0CJ85 424 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 DUX4L3P0CJ86 424 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 DUX4L4P0CJ87 422 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 DUX4L5P0CJ88 424 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 DUX4L6P0CJ89 424 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 DUX4L7P0CJ90 424 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 ZNF26P17031 533 aaPredicted RBP4.35□□□□□ -1.71
HOXB3-213ENST00000552000 BGNP21810 368 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 CD200P41217 278 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 RGS6P49758 472 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 BMXP51813 675 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 RAD23AP54725 363 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 ABCE1P61221 599 aaKnown RBP4.35□□□□□ -1.71
HOXB3-213ENST00000552000 ELF3P78545 371 aaPredicted RBP4.35□□□□□ -1.71
HOXB3-213ENST00000552000 EGFEM1PQ0D2K5 195 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 SCARB2Q14108 478 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 LRRC75BQ2VPJ9 315 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 ENTPD8Q5MY95 495 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 BEND6Q5SZJ8 279 aaPredicted RBP4.35□□□□□ -1.71
HOXB3-213ENST00000552000 CRIP3Q6Q6R5 217 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 DUX4L9Q6RFH8 374 aaPredicted RBP4.35□□□□□ -1.71
HOXB3-213ENST00000552000 FAM90A1Q86YD7 464 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 CMTM4Q8IZR5 234 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 OR2C3Q8N628 320 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 Q8N7P7 452 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 PCYOX1LQ8NBM8 494 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 MNS1Q8NEH6 495 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 OR4D11Q8NGI4 311 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 OR51G2Q8NGK0 314 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 OR5L1Q8NGL2 311 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 OR9I1Q8NGQ6 314 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 PFN4Q8NHR9 129 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 MUC7Q8TAX7 377 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 SLC7A13Q8TCU3 470 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 ADAMTS16Q8TE57 1224 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 WIPF2Q8TF74 440 aaPredicted RBP4.35□□□□□ -1.71
HOXB3-213ENST00000552000 GTF2H4Q92759 462 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 TNFRSF14Q92956 283 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 ERGIC1Q969X5 290 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 RASD2Q96D21 266 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 ZNF583Q96ND8 569 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 SORT1Q99523 831 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 SPATA25Q9BR10 227 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 CPPED1Q9BRF8 314 aaPredicted RBP4.35□□□□□ -1.71
HOXB3-213ENST00000552000 DCTN5Q9BTE1 182 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 CHID1Q9BWS9 393 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 C20orf27Q9GZN8 174 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 PAIP1Q9H074 479 aaKnown RBP4.35□□□□□ -1.71
HOXB3-213ENST00000552000 TXNIPQ9H3M7 391 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 WDR55Q9H6Y2 383 aaPredicted RBP4.35□□□□□ -1.71
HOXB3-213ENST00000552000 DUX4Q9UBX2 424 aa4.35□□□□□ -1.71
HOXB3-213ENST00000552000 A0A1B0GWJ7 208 aa4.34□□□□□ -1.71
HOXB3-213ENST00000552000 hCG_1807616A0A1W2PRN6 198 aa4.34□□□□□ -1.71
HOXB3-213ENST00000552000 OR6C6A6NF89 314 aa4.34□□□□□ -1.71
HOXB3-213ENST00000552000 A6NLC8 198 aa4.34□□□□□ -1.71
HOXB3-213ENST00000552000 H7C1C5 153 aa4.34□□□□□ -1.71
HOXB3-213ENST00000552000 MT-ND1P03886 318 aa4.34□□□□□ -1.71
HOXB3-213ENST00000552000 CHRM2P08172 466 aa4.34□□□□□ -1.71
HOXB3-213ENST00000552000 CCDC159P0C7I6 412 aa4.34□□□□□ -1.71
HOXB3-213ENST00000552000 FAHP16930 419 aa4.34□□□□□ -1.71
HOXB3-213ENST00000552000 HOXB9P17482 250 aaPredicted RBP4.34□□□□□ -1.71
HOXB3-213ENST00000552000 SLC1A6P48664 564 aa4.34□□□□□ -1.71
HOXB3-213ENST00000552000 UBE2E1P51965 193 aa4.34□□□□□ -1.71
HOXB3-213ENST00000552000 POLR2JP52435 117 aaKnown RBP4.34□□□□□ -1.71
HOXB3-213ENST00000552000 RPL27P61353 136 aaKnown RBP4.34□□□□□ -1.71
HOXB3-213ENST00000552000 LCN6P62502 163 aa4.34□□□□□ -1.71
HOXB3-213ENST00000552000 DCTN2Q13561 401 aaKnown RBP4.34□□□□□ -1.71
HOXB3-213ENST00000552000 OR8G1Q15617 311 aa4.34□□□□□ -1.71
HOXB3-213ENST00000552000 DUSP7Q16829 419 aa4.34□□□□□ -1.71
HOXB3-213ENST00000552000 SLC2A7Q6PXP3 512 aa4.34□□□□□ -1.71
HOXB3-213ENST00000552000 ZNF826PQ6ZT77 177 aa4.34□□□□□ -1.71
HOXB3-213ENST00000552000 MSANTD1Q6ZTZ1 278 aa4.34□□□□□ -1.71
HOXB3-213ENST00000552000 MSRB3Q8IXL7 192 aa4.34□□□□□ -1.71
HOXB3-213ENST00000552000 OR8H2Q8N162 312 aa4.34□□□□□ -1.71
HOXB3-213ENST00000552000 FAM216BQ8N7L0 139 aa4.34□□□□□ -1.71
HOXB3-213ENST00000552000 DTX3Q8N9I9 347 aa4.34□□□□□ -1.71
HOXB3-213ENST00000552000 LY6G5BQ8NDX9 201 aa4.34□□□□□ -1.71
HOXB3-213ENST00000552000 GPR32P1Q8NGA4 272 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms