RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 ZNF766Q5HY98 468 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 ZNF627Q7L945 461 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 OR2W3Q7Z3T1 314 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 CDH26Q8IXH8 852 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 ACBD4Q8NC06 268 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 CCDC54Q8NEL0 328 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 OR4C16Q8NGL9 310 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 OR1F12Q8NHA8 337 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 AKR7LQ8NHP1 331 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 GIMAP1Q8WWP7 306 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 HAS2Q92819 552 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 SPTSSAQ969W0 71 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 FAM46BQ96A09 425 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 SPACA5Q96QH8 159 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 OR2H1Q9GZK4 316 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 RNF122Q9H9V4 155 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 MOV10Q9HCE1 1003 aaKnown RBP10.07□□□□□ -0.8
RAB5C-208ENST00000551338 ACKR4Q9NPB9 350 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 SLC7A10Q9NS82 523 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 FBLN5Q9UBX5 448 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 FLVCR2Q9UPI3 526 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 ZNF724A8MTY0 619 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 RAB27BO00194 218 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 ACTL6AO96019 429 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 MMP7P09237 267 aaPredicted RBP10.06□□□□□ -0.8
RAB5C-208ENST00000551338 PATE4P0C8F1 98 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 PSMB1P20618 241 aaKnown RBP10.06□□□□□ -0.8
RAB5C-208ENST00000551338 NBL1P41271 181 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 OR3A4PP47883 348 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 ARG2P78540 354 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 PSG4Q00888 419 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 ECH1Q13011 328 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 STK11Q15831 433 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 PCGF3Q3KNV8 242 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 ZNF260Q3ZCT1 412 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 RNFT1Q5M7Z0 435 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 AWAT2Q6E213 333 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 DRAM2Q6UX65 266 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 SKA3Q8IX90 412 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 TUSC5Q8IXB3 177 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 TMEM178AQ8NBL3 297 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 FNDC9Q8TBE3 224 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 DEDD2Q8WXF8 326 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 AQP3Q92482 292 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 ITFG2Q969R8 447 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 SEH1LQ96EE3 360 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 CHST5Q9GZS9 411 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 OR10A2Q9H208 303 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 OR51J1Q9H342 316 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 EXO5Q9H790 373 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 BCO1Q9HAY6 547 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 SCPEP1Q9HB40 452 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 TAS2R8Q9NYW2 309 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 ZNF224Q9NZL3 707 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 EMC3Q9P0I2 261 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 SPRR3Q9UBC9 169 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 MCTS1Q9ULC4 181 aaKnown RBP10.06□□□□□ -0.8
RAB5C-208ENST00000551338 MRPS28Q9Y2Q9 187 aaKnown RBP10.06□□□□□ -0.8
RAB5C-208ENST00000551338 CSAG2Q9Y5P2 127 aa10.06□□□□□ -0.8
RAB5C-208ENST00000551338 RPL36A-HNRNPH2H7BZ11 118 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 ARPC1BO15143 372 aaKnown RBP10.05□□□□□ -0.8
RAB5C-208ENST00000551338 PRAF2O60831 178 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 PEX14O75381 377 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 MRPL33O75394 65 aaKnown RBP10.05□□□□□ -0.8
RAB5C-208ENST00000551338 NDUFB6O95139 128 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 IGHV3-9P01782 118 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 LPLP06858 475 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 HCKP08631 526 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 AKAIN1P0CW23 69 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 FAHP16930 419 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 FAUP35544 74 aaKnown RBP10.05□□□□□ -0.8
RAB5C-208ENST00000551338 HTR5AP47898 357 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 VEGFCP49767 419 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 FOXG1P55316 489 aaPredicted RBP10.05□□□□□ -0.8
RAB5C-208ENST00000551338 ACTBP60709 375 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 ACTG1P63261 375 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 ARF1P84077 181 aaKnown RBP10.05□□□□□ -0.8
RAB5C-208ENST00000551338 PMP22Q01453 160 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 IFITM2Q01629 132 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 SLC10A1Q14973 349 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 NRN1LQ496H8 165 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 CD276Q5ZPR3 534 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 GLIPR1L1Q6UWM5 242 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 UTS2BQ765I0 119 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 SLC16A14Q7RTX9 510 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 TMPRSS7Q7RTY8 843 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 CDH24Q86UP0 819 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 NOXA1Q86UR1 476 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 ANGPTL5Q86XS5 388 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 OR11H7Q8NGC8 314 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 OR52H1Q8NGJ2 320 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 SGK3Q96BR1 496 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 CMBLQ96DG6 245 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 NUDT16L1Q9BRJ7 211 aaKnown RBP10.05□□□□□ -0.8
RAB5C-208ENST00000551338 ACTR6Q9GZN1 396 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 LPAR5Q9H1C0 372 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 DEFB127Q9H1M4 99 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 MED28Q9H204 178 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 OR10A4Q9H209 315 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 TP63Q9H3D4 680 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms