RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 GSK3BP49841 420 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 PRKXP51817 358 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 SLC7A2P52569 658 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 CSNK2BP67870 215 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 ZNF92Q03936 586 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 PPP1R8Q12972 351 aaKnown RBP5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 AQP6Q13520 282 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 OR8G1Q15617 311 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 TAF9Q16594 264 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 GLYATL3Q5SZD4 288 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 GPR157Q5UAW9 335 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 FBXW12Q6X9E4 464 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 C9orf139Q6ZV77 190 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 ZER1Q7Z7L7 766 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 WDR86Q86TI4 376 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 FAM90A1Q86YD7 464 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 OFCC1Q8IZS5 231 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 FAM216BQ8N7L0 139 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 NPEPL1Q8NDH3 523 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 SDR9C7Q8NEX9 313 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 OR8J3Q8NGG0 315 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 SPRYD4Q8WW59 207 aaPredicted RBP5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 ACOT11Q8WXI4 607 aaPredicted RBP5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 ST8SIA4Q92187 359 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 RORBQ92753 470 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 FAM162AQ96A26 154 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 CCL13Q99616 98 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 CITED1Q99966 193 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 ELL3Q9HB65 397 aaPredicted RBP5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 BEX1Q9HBH7 125 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 PNRC2Q9NPJ4 139 aaKnown RBP5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 SNTG1Q9NSN8 517 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 MRPL22Q9NWU5 206 aaKnown RBP5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 MIOXQ9UGB7 285 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 B9D1Q9UPM9 204 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 FOXJ3Q9UPW0 622 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 AURKCQ9UQB9 309 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 SIGLEC7Q9Y286 467 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 COL7A1Q02388 2944 aa5.64□□□□□ -1.51
PRPF40B-214ENST00000551320 IGHV1-69DA0A0B4J2H0 117 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 hCG_1807616A0A1W2PRN6 198 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 OR6C68A6NDL8 312 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 A6NLC8 198 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 IQCF6A8MYZ5 107 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 ZNF879B4DU55 563 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 H3BSA7 217 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 DVL1O14640 695 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 SURF4O15260 269 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 NDUFB2O95178 105 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 IGHV1-69P01742 117 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 HLA-DQA2P01906 255 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 GYPBP06028 91 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 H1F0P07305 194 aaKnown RBP5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 COX5BP10606 129 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 CLUP10909 449 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 SDHAP31040 664 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 GGT2P36268 569 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 PSMB10P40306 273 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 MDH1P40925 334 aaKnown RBP5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 RAD23AP54725 363 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 ERVFRD-1P60508 538 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 RPL11P62913 178 aaKnown RBP5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 HIST1H3AP68431 136 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 TRAP1Q12931 704 aaKnown RBP5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 LY6EQ16553 131 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 IFI44LQ53G44 452 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 HIST2H3PS2Q5TEC6 136 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 METTL11BQ5VVY1 283 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 SLC18B1Q6NT16 456 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 UNQ6126/PRO20091Q6UXV3 157 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 Q6ZSV7 163 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 TMPRSS11FQ6ZWK6 438 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 HIST2H3AQ71DI3 136 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 BTN2A1Q7KYR7 527 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 VMO1Q7Z5L0 202 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 SCCPDHQ8NBX0 429 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 SLC26A10Q8NG04 563 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 OR9Q1Q8NGQ5 310 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 OR4F5Q8NH21 305 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 PPP1R35Q8TAP8 253 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 RASSF5Q8WWW0 418 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 LZICQ8WZA0 190 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 APOBEC3DQ96AK3 386 aaPredicted RBP5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 PLEKHA8Q96JA3 519 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 WDFY2Q96P53 400 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 ADAT1Q9BUB4 502 aaKnown RBP5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 SIRPDQ9H106 197 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 SLITRK2Q9H156 845 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 EGLN3Q9H6Z9 239 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 TCF7L1Q9HCS4 588 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 NRIP3Q9NQ35 241 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 NDUFAF4Q9P032 175 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 STX18Q9P2W9 335 aaKnown RBP5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 ONECUT1Q9UBC0 465 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 ENPP4Q9Y6X5 453 aa5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 KMT2CQ8NEZ4 4911 aaKnown RBP5.63□□□□□ -1.51
PRPF40B-214ENST00000551320 ZNF816-ZNF321PA0A0X1KG74 233 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 GGT3PA6NGU5 568 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 CD300LBA8K4G0 201 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 TNFRSF13BO14836 293 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms